FFCP PHASE1:Hg19::chr6:42713792..42713847,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:42713792..42713847,-
|short_description=p1@TBCC
|description=CAGE_peak_1_at_TBCC_5end
|association_with_transcript=0bp_to_ENST00000372876_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6903 | |EntrezGene=6903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11580 | |HGNC=11580 | ||
|TSSclassifier=strong | |||
|UniProt=Q15814 | |UniProt=Q15814 | ||
|association_with_transcript=0bp_to_ENST00000372876_5end | |||
|cluster_id=chr6:42713792..42713847,- | |||
|coexpression_cluster_id=C1704 | |||
|description=CAGE_peak_1_at_TBCC_5end | |||
|id=chr6:42713792..42713847,- | |||
|ontology_enrichment_celltype=CL:0000791!1.30e-11!18;CL:0000789!1.30e-11!18;CL:0002420!1.30e-11!18;CL:0002419!1.30e-11!18;CL:0000790!1.30e-11!18;CL:0000625!3.95e-08!11;CL:0000738!1.79e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.31e-11;18!CL:0000789;1.31e-11;18!CL:0002419;1.31e-11;18!CL:0000625;3.81e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.30e-11,18;CL:0000789,1.30e-11,18;CL:0002420,1.30e-11,18;CL:0002419,1.30e-11,18;CL:0000790,1.30e-11,18;CL:0000625,3.95e-08,11;CL:0000738,8.82e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.31e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TBCC | |||
}} | }} |
Latest revision as of 20:24, 18 September 2015
Short description: | p1@TBCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBCC_5end |
Coexpression cluster: | C1704_CD4_Dendritic_CD8_CD19_Natural_Basophils_Eosinophils |
Association with transcript: | 0bp_to_ENST00000372876_5end |
EntrezGene: | TBCC |
HGNC: | 11580 |
UniProt: | Q15814 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.30e-11 | 18 |
alpha-beta T cell | 1.30e-11 | 18 |
immature T cell | 1.30e-11 | 18 |
mature T cell | 1.30e-11 | 18 |
immature alpha-beta T cell | 1.30e-11 | 18 |
CD8-positive, alpha-beta T cell | 3.95e-08 | 11 |
leukocyte | 8.82e-08 | 136 |