FFCP PHASE1:Hg19::chr6:50786057..50786069,+: Difference between revisions
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|id=chr6:50786057..50786069,+
|short_description=p9@TFAP2B
|description=CAGE_peak_9_at_TFAP2B_5end
|association_with_transcript=-366bp_to_ENST00000344788,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7021 | |EntrezGene=7021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |HGNC=11743 | ||
|TSSclassifier=strong | |||
|UniProt=Q92481 | |UniProt=Q92481 | ||
|association_with_transcript=-366bp_to_ENST00000344788,ENST00000393655_5end | |||
|cluster_id=chr6:50786057..50786069,+ | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_9_at_TFAP2B_5end | |||
|id=chr6:50786057..50786069,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.29e-20!5;CL:0002367!1.74e-09!2;CL:0002536!7.54e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002321;1.26e-19;15!CL:0000222;3.56e-19;1!CL:0000333;1.21e-15;5!CL:0000197;5.59e-13;6!CL:0000098;5.59e-13;6!CL:0002167;5.59e-13;6!CL:0002367;2.85e-10;2!CL:0000710;1.03e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,5.42e-13,6;CL:0000098,5.42e-13,6;CL:0002167,5.42e-13,6;CL:0002367,3.27e-10,2;CL:0000710,1.03e-08,20;CL:0000133,1.71e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.30e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;3.79e-17;10!DOID:169;3.34e-13;6!DOID:3193;1.43e-10;2!DOID:962;1.43e-10;2!DOID:3095;3.93e-08;22!DOID:2994;3.93e-08;22!DOID:1192;1.82e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.79e-17,10;DOID:169,3.34e-13,6;DOID:3193,1.43e-10,2;DOID:962,1.43e-10,2;DOID:3095,3.93e-08,22;DOID:2994,3.93e-08,22;DOID:1192,1.82e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005969!1.74e-09!2;UBERON:0003956!1.74e-09!2;UBERON:0002203!8.86e-07!6;UBERON:0001768!8.86e-07!6;UBERON:0001044!9.97e-07!6;UBERON:0003293!9.97e-07!6;UBERON:0003294!9.97e-07!6;UBERON:0010047!9.97e-07!6;UBERON:0000167!9.97e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.21e-15;5!UBERON:0002410;1.21e-15;5!UBERON:0003714;1.43e-10;2!UBERON:0005969;2.85e-10;2!UBERON:0003956;2.85e-10;2!UBERON:0000010;4.09e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.21e-15,5;UBERON:0002410,1.21e-15,5;UBERON:0003714,1.43e-10,2;UBERON:0005969,3.27e-10,2;UBERON:0003956,3.27e-10,2;UBERON:0000010,4.09e-09,8 | |||
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| ||
|short_description=p9@TFAP2B | |||
}} | }} |
Latest revision as of 05:18, 19 September 2015
Short description: | p9@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TFAP2B_5end |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | -366bp_to_ENST00000344788, ENST00000393655_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | Q92481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 5.42e-13 | 6 |
sensory epithelial cell | 5.42e-13 | 6 |
olfactory epithelial cell | 5.42e-13 | 6 |
trabecular meshwork cell | 3.27e-10 | 2 |
neurecto-epithelial cell | 1.03e-08 | 20 |
neurectodermal cell | 1.71e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.21e-15 | 5 |
autonomic nervous system | 1.21e-15 | 5 |
neural tissue | 1.43e-10 | 2 |
reticulum trabeculare | 3.27e-10 | 2 |
aqueous drainage system | 3.27e-10 | 2 |
peripheral nervous system | 4.09e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.79e-17 | 10 |
neuroendocrine tumor | 3.34e-13 | 6 |
peripheral nerve sheath neoplasm | 1.43e-10 | 2 |
neurofibroma | 1.43e-10 | 2 |
germ cell and embryonal cancer | 3.93e-08 | 22 |
germ cell cancer | 3.93e-08 | 22 |
peripheral nervous system neoplasm | 1.82e-07 | 3 |