FFCP PHASE1:Hg19::chr3:113616338..113616364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=54762 | |EntrezGene=54762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=25252 | |HGNC=25252 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=C9K0V2 | |UniProt=C9K0V2 | ||
|association_with_transcript=0bp_to_ENST00000488680_5end | |association_with_transcript=0bp_to_ENST00000488680_5end | ||
|cluster_id=chr3:113616338..113616364,+ | |||
|description=CAGE_peak_2_at_GRAMD1C_5end | |description=CAGE_peak_2_at_GRAMD1C_5end | ||
|id=chr3:113616338..113616364,+ | |id=chr3:113616338..113616364,+ |
Latest revision as of 16:25, 19 September 2015
Short description: | p2@GRAMD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRAMD1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000488680_5end |
EntrezGene: | GRAMD1C |
HGNC: | 25252 |
UniProt: | C9K0V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@GRAMD1C |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.74e-07 | 3 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
digestive system | 2.14e-20 | 145 |
digestive tract | 2.14e-20 | 145 |
primitive gut | 2.14e-20 | 145 |
endoderm-derived structure | 2.39e-18 | 160 |
endoderm | 2.39e-18 | 160 |
presumptive endoderm | 2.39e-18 | 160 |
subdivision of digestive tract | 9.28e-18 | 118 |
intestine | 8.15e-12 | 17 |
gastrointestinal system | 1.43e-10 | 25 |
adult organism | 3.95e-10 | 114 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.48e-12 | 14 |
carcinoma | 4.62e-12 | 106 |
cell type cancer | 9.34e-10 | 143 |
Showing 1 to 3 of 3 entries