FFCP PHASE1:Hg19::chr8:123580859..123580902,-: Difference between revisions
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|id=chr8:123580859..123580902,-
|short_description=p@chr8:123580859..123580902,-
|description=CAGE_peak_at_chr8:123580859..123580902,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:123580859..123580902,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr8:123580859..123580902,- | |||
|id=chr8:123580859..123580902,- | |||
|ontology_enrichment_celltype=CL:0002076!3.44e-16!43;CL:0000223!5.23e-12!59;CL:0002251!2.48e-10!21;CL:0002368!3.37e-08!13;CL:0000035!4.22e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002251;4.24e-13;20!CL:0002623;8.78e-12;3!CL:0002076;9.72e-10;42!CL:0000244;1.01e-08;4!CL:0000731;1.01e-08;4!CL:0002327;1.34e-08;4!CL:0000622;3.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.37e-13,42;CL:0002251,2.95e-13,20;CL:0000223,4.71e-12,58;CL:0002623,9.66e-12,3;CL:0000066,7.55e-09,253;CL:0000244,1.22e-08,4;CL:0000731,1.22e-08,4;CL:0002327,1.62e-08,4;CL:0000622,3.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.52e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.80e-29;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.87e-29,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.35e-09!95;UBERON:0003729!1.39e-08!5;UBERON:0000161!1.78e-07!35;UBERON:0003343!1.84e-07!4;UBERON:0004785!1.84e-07!4;UBERON:0000166!2.59e-07!21;UBERON:0001004!3.23e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.39e-14;4!UBERON:0004785;1.39e-14;4!UBERON:0000161;7.02e-14;19!UBERON:0000166;7.02e-14;19!UBERON:0000974;9.70e-10;6!UBERON:0003729;2.03e-09;13!UBERON:0000165;7.22e-09;28!UBERON:0001911;1.34e-08;4!UBERON:0000486;2.37e-07;12!UBERON:0000365;4.72e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,6.42e-15,4;UBERON:0004785,6.42e-15,4;UBERON:0000166,6.83e-12,22;UBERON:0003729,1.35e-09,13;UBERON:0000165,1.31e-08,29;UBERON:0000930,1.31e-08,29;UBERON:0001911,1.62e-08,4;UBERON:0005333,1.62e-08,4;UBERON:0008425,1.62e-08,4;UBERON:0005311,1.62e-08,4;UBERON:0000161,2.87e-08,36;UBERON:0000365,5.47e-07,5 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,1.03052529238439,0,0,0,0,0.252433774244115,0.460249493211497,0,0.355009592516614,0.906768884048762,0.67824236924195,2.12586938479627,0.818238361772504,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.100528972411631,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,1.52249488594842,2.03443756959773,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02738161275192,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,1.99267679560631,0.368738337083406,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,1.06537035187876,0,0.519254429183621,1.51073491997947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0.384380134730212,2.80747967488085,0.910420027699949,0,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,1.15466535270614,1.34060455107157,0,0,2.15252686335615,0,1.33029046061003,4.36474460393223,0,0,0,0,0,0,0,0,0,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,32.1073845891247,1.67121139316383,0,2.76444631889309,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,2.04828206913899,0,0,0,0,0,0,0,0,0,0,0,0,2.23077990845765,0,0,0,0,0,1.91400695839152,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.45693242475896,0,0,0,0,0,0,0,0,0.330991955875499,0,1.19472429772959,0,1.66409607615766,0,1.7638631534588,1.48000651186684,0,0.171986032471617,0,0,0,0,0,0,0,0.397429223405979,0,0.195551382734803,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,2.59263438078475,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,3.35434687599266,0,0,0,0,0.383830394638891,0,0.662091970365432,0,0,0,0.979762080328227,0,0,6.13396878427518,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,1.62474530350739,0,0,0,0,0,1.79105763464249,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0,1.65882483136342,0,0,0,0,0,0.727394636810238,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,2.12026975135057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20927140302209,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3276450168169,2.59533391365029,1.65085738669511,1.84841065840541,0.762764190934334,2.0710797781803,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,6.89634691730829,0.156986185701028,0,0,0,0,0,0,0,0,0,0,5.59483643240199,7.5116129921338,1.38251932362818,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.60698544745092,11.9984256383335,0.160482733378337,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,1.73050624849516,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.573777643141411,0.665320713092027,0.89543595472072,0,0,1.52702843581198,2.34640942403454,0.122241444182866,0,0,0,0 | 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| ||
|short_description=p@chr8:123580859..123580902,- | |||
}} | }} |
Latest revision as of 14:30, 31 July 2015
Short description: | p@chr8:123580859..123580902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:123580859..123580902, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.37e-13 | 42 |
epithelial cell of alimentary canal | 2.95e-13 | 20 |
endodermal cell | 4.71e-12 | 58 |
acinar cell of salivary gland | 9.66e-12 | 3 |
epithelial cell | 7.55e-09 | 253 |
transitional epithelial cell | 1.22e-08 | 4 |
urothelial cell | 1.22e-08 | 4 |
mammary gland epithelial cell | 1.62e-08 | 4 |
acinar cell | 3.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 6.42e-15 | 4 |
respiratory system mucosa | 6.42e-15 | 4 |
oral opening | 6.83e-12 | 22 |
mouth mucosa | 1.35e-09 | 13 |
mouth | 1.31e-08 | 29 |
stomodeum | 1.31e-08 | 29 |
mammary gland | 1.62e-08 | 4 |
mammary bud | 1.62e-08 | 4 |
mammary ridge | 1.62e-08 | 4 |
mammary placode | 1.62e-08 | 4 |
orifice | 2.87e-08 | 36 |
urothelium | 5.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.87e-29 | 14 |