FFCP PHASE1:Hg19::chr12:118847936..118847947,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:118847936..118847947,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr12:118847936..118847947,+ | |||
|id=chr12:118847936..118847947,+ | |||
|ontology_enrichment_celltype=CL:0000764!4.70e-21!2;CL:0000765!4.70e-21!2;CL:0000050!4.70e-21!2;CL:0000038!4.70e-21!2;CL:0000558!4.70e-21!2;CL:0000547!4.70e-21!2;CL:0000549!4.70e-21!2;CL:0000550!4.70e-21!2;CL:0000552!4.70e-21!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.43e-12;2!CL:0000558;3.43e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.62e-12,2;CL:0000765,3.62e-12,2;CL:0000050,3.62e-12,2;CL:0000038,3.62e-12,2;CL:0000558,3.62e-12,2;CL:0000547,3.62e-12,2;CL:0000549,3.62e-12,2;CL:0000550,3.62e-12,2;CL:0000552,3.62e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.25e-42!15;UBERON:0000179!1.25e-42!15;UBERON:0000463!1.25e-42!15;UBERON:0007023!2.19e-17!115;UBERON:0005418!2.42e-11!1;UBERON:0001389!2.42e-11!1;UBERON:0000026!2.42e-11!1;UBERON:0008784!2.42e-11!1;UBERON:0006058!2.42e-11!1;UBERON:0003663!2.42e-11!1;UBERON:0001383!2.42e-11!1;UBERON:0004256!2.42e-11!1;UBERON:0002529!2.42e-11!1;UBERON:0004708!2.42e-11!1;UBERON:0002101!2.42e-11!1;UBERON:0004709!2.42e-11!1;UBERON:0003661!2.42e-11!1;UBERON:0002471!2.42e-11!1;UBERON:0004357!2.42e-11!1;UBERON:0009872!2.42e-11!1;UBERON:0004347!2.42e-11!1;UBERON:0005420!2.42e-11!1;UBERON:0005732!2.42e-11!1;UBERON:0006057!2.42e-11!1;UBERON:0000978!2.42e-11!1;UBERON:0002103!2.42e-11!1;UBERON:0001665!2.42e-11!1;UBERON:0003823!2.42e-11!1;UBERON:0000154!2.42e-11!1;UBERON:0005733!2.42e-11!1;UBERON:0005730!2.42e-11!1;UBERON:0002135!2.68e-11!1;UBERON:0006834!6.00e-11!1;UBERON:0002390!2.10e-08!102;UBERON:0003061!2.10e-08!102;UBERON:0004535!8.50e-08!110;UBERON:0001009!1.50e-07!113;UBERON:0002193!1.57e-07!112;UBERON:0003081!6.98e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.44e-93;15!UBERON:0000179;5.44e-93;15!UBERON:0000463;5.44e-93;15!UBERON:0002390;3.40e-41;32!UBERON:0002193;1.28e-23;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.12e-93,15;UBERON:0000179,5.12e-93,15;UBERON:0000463,5.12e-93,15;UBERON:0007023,1.98e-15,114;UBERON:0002390,4.43e-14,98;UBERON:0003061,4.43e-14,98;UBERON:0004535,9.04e-13,109;UBERON:0002193,9.04e-13,108;UBERON:0001009,2.01e-12,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61171413848254,9.94028369285088,5.69647187174163,3.57347663186684,1.23408681925858,5.83625980073446,15.6609116799053,12.6900028207083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:118847936..118847947,+ | |||
}} |
Latest revision as of 05:34, 24 July 2015
Short description: | p@chr12:118847936..118847947, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:118847936..118847947, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.62e-12 | 2 |
erythroblast | 3.62e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 3.62e-12 | 2 |
erythroid progenitor cell | 3.62e-12 | 2 |
reticulocyte | 3.62e-12 | 2 |
proerythroblast | 3.62e-12 | 2 |
basophilic erythroblast | 3.62e-12 | 2 |
polychromatophilic erythroblast | 3.62e-12 | 2 |
orthochromatic erythroblast | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.12e-93 | 15 |
haemolymphatic fluid | 5.12e-93 | 15 |
organism substance | 5.12e-93 | 15 |
adult organism | 1.98e-15 | 114 |
hematopoietic system | 4.43e-14 | 98 |
blood island | 4.43e-14 | 98 |
cardiovascular system | 9.04e-13 | 109 |
hemolymphoid system | 9.04e-13 | 108 |
circulatory system | 2.01e-12 | 112 |