FFCP PHASE1:Hg19::chr12:6960113..6960124,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14624 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=297bp_to_ENST00000535406_5end | |||
|cluster_id=chr12:6960113..6960124,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_8_at_CDCA3_5end | |||
|id=chr12:6960113..6960124,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.57e-09;4!CL:1000306;1.57e-09;4!CL:0002547;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.44e-09,4;CL:1000306,1.57e-09,4;CL:0002547,1.57e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.16e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.34e-30;17!UBERON:0002108;1.70e-27;4!UBERON:0005409;1.55e-23;22!UBERON:0004921;2.01e-15;33!UBERON:0001242;1.57e-09;4!UBERON:0001262;1.57e-09;4!UBERON:0004786;1.57e-09;4!UBERON:0004808;1.57e-09;4!UBERON:0001277;1.57e-09;4!UBERON:0004797;1.57e-09;4!UBERON:0000415;1.57e-09;4!UBERON:0007240;1.57e-09;4!UBERON:0005742;1.57e-09;4!UBERON:0005734;1.57e-09;4!UBERON:0004664;1.57e-09;4!UBERON:0004663;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.82e-30,17;UBERON:0002108,1.82e-27,4;UBERON:0005409,6.29e-21,25;UBERON:0001242,1.44e-09,4;UBERON:0001262,1.44e-09,4;UBERON:0004786,1.44e-09,4;UBERON:0004808,1.44e-09,4;UBERON:0001277,1.44e-09,4;UBERON:0000415,1.57e-09,4;UBERON:0007240,1.57e-09,4;UBERON:0005742,1.57e-09,4;UBERON:0005734,1.57e-09,4;UBERON:0004664,1.57e-09,4;UBERON:0004663,1.57e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0,0,1.06400514659507,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.538545866458633,0,0,0,0,1.02193298195737,0,0,0,0.392125068635479,0,0,0,0,0,0.706765357169704,0,0,3.18447232212021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0.219284049578707,0.353378291891762,0.192914038270915,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0.118920090777569,0,0,0,7.40871917836269,3.0598338470554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@CDCA3 | |||
}} |
Latest revision as of 04:59, 20 September 2015
Short description: | p8@CDCA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDCA3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 297bp_to_ENST00000535406_5end |
EntrezGene: | CDCA3 |
HGNC: | 14624 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.44e-09 | 4 |
fibroblast of tunica adventitia of artery | 1.57e-09 | 4 |
fibroblast of the aortic adventitia | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.82e-30 | 17 |
small intestine | 1.82e-27 | 4 |
gastrointestinal system | 6.29e-21 | 25 |
intestinal mucosa | 1.44e-09 | 4 |
wall of intestine | 1.44e-09 | 4 |
gastrointestinal system mucosa | 1.44e-09 | 4 |
gastrointestinal system epithelium | 1.44e-09 | 4 |
intestinal epithelium | 1.44e-09 | 4 |
artery wall | 1.57e-09 | 4 |
tunica adventitia of artery | 1.57e-09 | 4 |
adventitia | 1.57e-09 | 4 |
tunica adventitia of blood vessel | 1.57e-09 | 4 |
aorta tunica adventitia | 1.57e-09 | 4 |
aorta wall | 1.57e-09 | 4 |