FFCP PHASE1:Hg19::chr8:143814432..143814436,-: Difference between revisions
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|id=chr8:143814432..143814436,-
|short_description=p@chr8:143814432..143814436,-
|description=CAGE_peak_at_chr8:143814432..143814436,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:143814432..143814436,- | |||
|description=CAGE_peak_at_chr8:143814432..143814436,- | |||
|id=chr8:143814432..143814436,- | |||
|ontology_enrichment_celltype=CL:0000244!2.06e-18!4;CL:0000731!2.06e-18!4;CL:0002327!4.16e-18!4;CL:0000066!5.52e-11!254;CL:1001319!2.60e-09!1;CL:1000600!2.60e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.17e-33;4!CL:0000317;6.48e-18;2!CL:1000448;6.48e-18;2!CL:0002308;6.48e-18;2!CL:0002140;6.48e-18;2!CL:0000244;1.50e-09;4!CL:0000731;1.50e-09;4!CL:0000622;5.73e-08;5!CL:0000154;7.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.63e-33,4;CL:0000317,6.48e-18,2;CL:1000448,6.48e-18,2;CL:0002308,6.48e-18,2;CL:0002140,6.48e-18,2;CL:0000244,1.44e-09,4;CL:0000731,1.44e-09,4;CL:0000622,5.73e-08,5;CL:0000154,7.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4362!5.48e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.46e-25!5;UBERON:0005910!2.38e-21!6;UBERON:0001911!4.16e-18!4;UBERON:0005333!4.16e-18!4;UBERON:0008425!4.16e-18!4;UBERON:0005311!4.16e-18!4;UBERON:0001255!2.56e-16!2;UBERON:0001556!2.56e-16!2;UBERON:0000997!1.60e-09!1;UBERON:0005056!1.60e-09!1;UBERON:0000076!2.53e-09!8;UBERON:0004645!2.60e-09!1;UBERON:0001256!2.60e-09!1;UBERON:0001259!2.60e-09!1;UBERON:0003100!2.00e-08!41;UBERON:0006554!7.79e-08!44;UBERON:0001008!1.21e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.84e-34;1!UBERON:0005056;1.84e-34;1!UBERON:0004176;1.84e-34;1!UBERON:0001911;1.17e-33;4!UBERON:0002419;6.48e-18;2!UBERON:0007771;6.48e-18;2!UBERON:0003297;6.48e-18;2!UBERON:0001821;6.48e-18;2!UBERON:0003487;6.48e-18;2!UBERON:0001820;6.48e-18;2!UBERON:0006562;9.86e-18;2!UBERON:0002365;3.95e-10;31!UBERON:0002330;3.95e-10;31!UBERON:0000365;6.78e-08;5!UBERON:0003100;1.06e-07;41!UBERON:0005910;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.84e-34,1;UBERON:0005056,1.84e-34,1;UBERON:0001911,1.63e-33,4;UBERON:0005333,1.63e-33,4;UBERON:0008425,1.63e-33,4;UBERON:0005311,1.63e-33,4;UBERON:0002419,6.48e-18,2;UBERON:0007771,6.48e-18,2;UBERON:0003297,6.48e-18,2;UBERON:0001821,6.48e-18,2;UBERON:0003487,6.48e-18,2;UBERON:0001820,6.48e-18,2;UBERON:0005089,6.48e-18,2;UBERON:0005088,6.48e-18,2;UBERON:0000076,2.38e-17,8;UBERON:0002365,2.60e-10,31;UBERON:0005085,2.60e-10,31;UBERON:0002330,2.60e-10,31;UBERON:0003100,5.58e-08,41;UBERON:0000365,6.55e-08,5;UBERON:0005910,8.48e-07,6 | |||
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|short_description=p@chr8:143814432..143814436,- | |||
}} | }} |
Latest revision as of 15:48, 31 July 2015
Short description: | p@chr8:143814432..143814436, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:143814432..143814436, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.63e-33 | 4 |
sebum secreting cell | 6.48e-18 | 2 |
epithelial cell of sweat gland | 6.48e-18 | 2 |
epithelial cell of skin gland | 6.48e-18 | 2 |
acinar cell of sebaceous gland | 6.48e-18 | 2 |
transitional epithelial cell | 1.44e-09 | 4 |
urothelial cell | 1.44e-09 | 4 |
acinar cell | 5.73e-08 | 5 |
protein secreting cell | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.84e-34 | 1 |
external female genitalia | 1.84e-34 | 1 |
mammary gland | 1.63e-33 | 4 |
mammary bud | 1.63e-33 | 4 |
mammary ridge | 1.63e-33 | 4 |
mammary placode | 1.63e-33 | 4 |
skin gland | 6.48e-18 | 2 |
epidermis gland | 6.48e-18 | 2 |
gland of integumental system | 6.48e-18 | 2 |
sebaceous gland | 6.48e-18 | 2 |
skin sebaceous gland | 6.48e-18 | 2 |
sweat gland | 6.48e-18 | 2 |
sweat gland placode | 6.48e-18 | 2 |
sebaceous gland placode | 6.48e-18 | 2 |
external ectoderm | 2.38e-17 | 8 |
exocrine gland | 2.60e-10 | 31 |
ectodermal placode | 2.60e-10 | 31 |
exocrine system | 2.60e-10 | 31 |
female organism | 5.58e-08 | 41 |
urothelium | 6.55e-08 | 5 |
transitional epithelium | 8.48e-07 | 6 |