FFCP PHASE1:Hg19::chr13:114188109..114188155,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:114188109..114188155,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr13:114188109..114188155,+ | |||
|id=chr13:114188109..114188155,+ | |||
|ontology_enrichment_celltype=CL:0002536!6.77e-10!2;CL:0002537!7.40e-09!5;CL:0002541!3.74e-07!3;CL:0000349!4.60e-07!3;CL:0002577!4.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.46e-17;7!CL:0000586;2.46e-17;7!CL:0002541;1.04e-10;3!CL:0000083;2.35e-08;4!CL:0002537;6.21e-07;5!CL:0000349;6.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.46e-17,7;CL:0000586,2.46e-17,7;CL:0002541,8.99e-11,3;CL:0000083,2.61e-08,4;CL:0002537,6.39e-07,5;CL:0000349,6.57e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.21e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.73e-29;1!DOID:10165;2.73e-29;1!DOID:1798;2.73e-29;1!DOID:1793;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.20e-29,1;DOID:10165,4.20e-29,1;DOID:1798,4.20e-29,1;DOID:1793,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.02e-30!14;UBERON:0000158!1.02e-30!14;UBERON:0000478!1.41e-20!24;UBERON:0003124!2.74e-16!7;UBERON:0000305!4.38e-16!7;UBERON:0006947!4.12e-14!3;UBERON:0004054!4.12e-14!3;UBERON:0004871!4.88e-14!8;UBERON:0003101!2.43e-11!22;UBERON:0000079!2.43e-11!22;UBERON:0001987!7.43e-11!4;UBERON:0004340!7.43e-11!4;UBERON:0005904!1.07e-10!4;UBERON:0003135!6.35e-10!11;UBERON:0004923!9.33e-09!57;UBERON:0005156!4.07e-08!59;UBERON:0000990!4.07e-08!59;UBERON:0004175!8.24e-08!25;UBERON:0000476!3.74e-07!3;UBERON:0000920!3.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.73e-29;1!UBERON:0005631;2.98e-12;10!UBERON:0000158;2.98e-12;10!UBERON:0003124;1.04e-10;3!UBERON:0000920;1.04e-10;3!UBERON:0006947;1.04e-10;3!UBERON:0004054;1.04e-10;3!UBERON:0005904;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.37e-29,1;UBERON:0000920,8.99e-11,3;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0005631,4.75e-09,14;UBERON:0000158,4.75e-09,14;UBERON:0005904,2.26e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.593929361665277,0.614321404198464,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,3.32103284316157,14.015510977939,1.5950057986596,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr13:114188109..114188155,+ | |||
}} |
Latest revision as of 14:48, 24 July 2015
Short description: | p@chr13:114188109..114188155, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114188109..114188155, + |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.46e-17 | 7 |
germ cell | 2.46e-17 | 7 |
chorionic membrane mesenchymal stem cell | 8.99e-11 | 3 |
epithelial cell of pancreas | 2.61e-08 | 4 |
amnion mesenchymal stem cell | 6.39e-07 | 5 |
extraembryonic cell | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.37e-29 | 1 |
egg chorion | 8.99e-11 | 3 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
extraembryonic membrane | 4.75e-09 | 14 |
membranous layer | 4.75e-09 | 14 |
duct of male reproductive system | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.20e-29 | 1 |
endocrine pancreas cancer | 4.20e-29 | 1 |
pancreatic endocrine carcinoma | 4.20e-29 | 1 |
pancreatic cancer | 2.61e-08 | 4 |