FFCP PHASE1:Hg19::chr8:145703727..145703759,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:145703727..145703759,+
|short_description=p2@PPP1R16A
|description=CAGE_peak_2_at_PPP1R16A_5end
|association_with_transcript=0bp_to_ENST00000533088_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84988 | |EntrezGene=84988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14941 | |HGNC=14941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533088_5end | |||
|cluster_id=chr8:145703727..145703759,+ | |||
|description=CAGE_peak_2_at_PPP1R16A_5end | |||
|id=chr8:145703727..145703759,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.66e-25!254;CL:0000220!9.90e-12!246;CL:0000548!1.54e-11!679;CL:0000004!1.54e-11!679;CL:0000255!1.54e-11!679;CL:0002321!3.87e-11!248;CL:0000012!8.93e-11!682;CL:0000063!3.54e-09!578;CL:0000223!9.05e-09!59;CL:0002076!5.57e-08!43;CL:0002368!9.08e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.04e-08;13!CL:0002202;1.29e-07;9!CL:0002632;1.29e-07;9!CL:0000359;6.84e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-19,253;CL:0002321,2.10e-09,250;CL:0000223,6.99e-09,58;CL:0002076,2.81e-08,42;CL:0002368,3.48e-08,13;CL:0002202,1.25e-07,9;CL:0002632,1.25e-07,9;CL:0000359,5.43e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.67e-15!235;DOID:14566!1.44e-14!239;DOID:305!8.75e-14!106;DOID:0050687!1.80e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.32e-12,106;DOID:0050687,1.45e-11,143;DOID:162,7.05e-10,235;DOID:14566,1.89e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.29e-10!169;UBERON:0000925!5.29e-10!169;UBERON:0006595!5.29e-10!169;UBERON:0002100!1.28e-09!216;UBERON:0003104!1.45e-09!238;UBERON:0009142!1.45e-09!238;UBERON:0000915!5.99e-08!52;UBERON:0008947!1.40e-07!38;UBERON:0003258!1.40e-07!38;UBERON:0001007!1.90e-07!155;UBERON:0001555!1.90e-07!155;UBERON:0007026!1.90e-07!155;UBERON:0009569!5.27e-07!113;UBERON:0000464!8.94e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;3.61e-08;37!UBERON:0001737;5.41e-08;9!UBERON:0001557;5.41e-08;9!UBERON:0000065;1.15e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,3.27e-08,38;UBERON:0003258,3.27e-08,38;UBERON:0001737,1.06e-07,9;UBERON:0001637,3.37e-07,42;UBERON:0003509,3.37e-07,42;UBERON:0004572,3.37e-07,42 | |||
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| ||
|short_description=p2@PPP1R16A | |||
}} | }} |
Latest revision as of 02:10, 17 September 2015
Short description: | p2@PPP1R16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP1R16A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533088_5end |
EntrezGene: | PPP1R16A |
HGNC: | 14941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.15e-19 | 253 |
embryonic cell | 2.10e-09 | 250 |
endodermal cell | 6.99e-09 | 58 |
endo-epithelial cell | 2.81e-08 | 42 |
respiratory epithelial cell | 3.48e-08 | 13 |
epithelial cell of tracheobronchial tree | 1.25e-07 | 9 |
epithelial cell of lower respiratory tract | 1.25e-07 | 9 |
vascular associated smooth muscle cell | 5.43e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 3.27e-08 | 38 |
endoderm of foregut | 3.27e-08 | 38 |
larynx | 1.06e-07 | 9 |
artery | 3.37e-07 | 42 |
arterial blood vessel | 3.37e-07 | 42 |
arterial system | 3.37e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.32e-12 | 106 |
cell type cancer | 1.45e-11 | 143 |
cancer | 7.05e-10 | 235 |
disease of cellular proliferation | 1.89e-09 | 239 |