FFCP PHASE1:Hg19::chr8:21916935..21916954,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:21916935..21916954,+
|short_description=p23@EPB49
|description=CAGE_peak_23_at_EPB49_5end
|association_with_transcript=76bp_to_ENST00000517305_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2039 | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |HGNC=3382 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJ56 | |UniProt=E5RJ56 | ||
|association_with_transcript=76bp_to_ENST00000517305_5end | |||
|cluster_id=chr8:21916935..21916954,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_23_at_EPB49_5end | |||
|id=chr8:21916935..21916954,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.18e-27;13!CL:0000182;3.53e-17;12!CL:0002535;3.24e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.68e-24,15;CL:0000182,3.63e-17,12;CL:0002535,3.24e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.14e-18;11!UBERON:0009497;6.48e-16;13!UBERON:0001041;2.93e-07;30!UBERON:0003104;6.51e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-37!115;UBERON:0001049!1.38e-15!57;UBERON:0005068!1.38e-15!57;UBERON:0006241!1.38e-15!57;UBERON:0007135!1.38e-15!57;UBERON:0003080!4.74e-14!42;UBERON:0002616!1.83e-13!59;UBERON:0002780!1.05e-12!41;UBERON:0001890!1.05e-12!41;UBERON:0006240!1.05e-12!41;UBERON:0000073!2.22e-12!94;UBERON:0001016!2.22e-12!94;UBERON:0000955!1.11e-11!69;UBERON:0006238!1.11e-11!69;UBERON:0003075!2.95e-11!86;UBERON:0007284!2.95e-11!86;UBERON:0005743!4.06e-11!86;UBERON:0001017!5.72e-11!82;UBERON:0001893!8.67e-11!34;UBERON:0002020!9.59e-11!34;UBERON:0003528!9.59e-11!34;UBERON:0002346!1.83e-10!90;UBERON:0001869!4.52e-10!32;UBERON:0002791!1.24e-09!33;UBERON:0003056!2.87e-09!61;UBERON:0000033!4.93e-08!123;UBERON:0002619!5.34e-08!22;UBERON:0000153!2.39e-07!129;UBERON:0007811!2.39e-07!129;UBERON:0004121!2.86e-07!169;UBERON:0001950!4.25e-07!20;UBERON:0000988!4.79e-07!3;UBERON:0000924!6.37e-07!173;UBERON:0006601!6.37e-07!173;UBERON:0000956!7.69e-07!25;UBERON:0000203!7.69e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.24e-12;2!UBERON:0004801;3.24e-12;2!UBERON:0002107;4.14e-11;19!UBERON:0006925;4.14e-11;19!UBERON:0002423;1.36e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.24e-12,2;UBERON:0004801,3.24e-12,2;UBERON:0002107,4.22e-11,19;UBERON:0006925,4.22e-11,19;UBERON:0008836,4.22e-11,19;UBERON:0008835,1.12e-09,22;UBERON:0003894,1.12e-09,22;UBERON:0009854,2.78e-09,23;UBERON:0007499,1.37e-08,25;UBERON:0009497,1.37e-08,25;UBERON:0000015,1.37e-08,25;UBERON:0002423,1.37e-08,25;UBERON:0006235,1.37e-08,25;UBERON:0004161,1.37e-08,25;UBERON:0009856,2.79e-08,26;UBERON:0002365,4.87e-07,31;UBERON:0002330,4.87e-07,31 | |||
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| ||
|short_description=p23@EPB49 | |||
}} | }} |
Latest revision as of 09:53, 17 September 2015
Short description: | p23@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_EPB49_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 76bp_to_ENST00000517305_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | E5RJ56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.68e-24 | 15 |
hepatocyte | 3.63e-17 | 12 |
epithelial cell of cervix | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.24e-12 | 2 |
cervix epithelium | 3.24e-12 | 2 |
liver | 4.22e-11 | 19 |
digestive gland | 4.22e-11 | 19 |
liver bud | 4.22e-11 | 19 |
hepatic diverticulum | 1.12e-09 | 22 |
liver primordium | 1.12e-09 | 22 |
digestive tract diverticulum | 2.78e-09 | 23 |
epithelial sac | 1.37e-08 | 25 |
epithelium of foregut-midgut junction | 1.37e-08 | 25 |
anatomical boundary | 1.37e-08 | 25 |
hepatobiliary system | 1.37e-08 | 25 |
foregut-midgut junction | 1.37e-08 | 25 |
septum transversum | 1.37e-08 | 25 |
sac | 2.79e-08 | 26 |
exocrine gland | 4.87e-07 | 31 |
exocrine system | 4.87e-07 | 31 |