FFCP PHASE1:Hg19::chr8:27850180..27850202,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:27850180..27850202,-
|short_description=p1@SCARA5
|description=CAGE_peak_1_at_SCARA5_5end
|association_with_transcript=0bp_to_ENST00000301906,ENST000003803...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286133 | |EntrezGene=286133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28701 | |HGNC=28701 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMJ2 | |UniProt=Q6ZMJ2 | ||
|association_with_transcript=0bp_to_ENST00000301906,ENST00000380385,uc003xgj.2,uc003xgl.2,uc010luz.2_5end | |||
|cluster_id=chr8:27850180..27850202,- | |||
|coexpression_cluster_id=C2924 | |||
|description=CAGE_peak_1_at_SCARA5_5end | |||
|id=chr8:27850180..27850202,- | |||
|ontology_enrichment_celltype=CL:0000136!3.34e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.42e-08;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.52e-43!115;UBERON:0001049!4.65e-11!57;UBERON:0005068!4.65e-11!57;UBERON:0006241!4.65e-11!57;UBERON:0007135!4.65e-11!57;UBERON:0003075!2.60e-10!86;UBERON:0007284!2.60e-10!86;UBERON:0000481!5.31e-10!347;UBERON:0002346!2.82e-09!90;UBERON:0000477!6.66e-09!286;UBERON:0003080!8.13e-09!42;UBERON:0002619!2.19e-08!22;UBERON:0002780!3.74e-08!41;UBERON:0001890!3.74e-08!41;UBERON:0006240!3.74e-08!41;UBERON:0002616!6.50e-08!59;UBERON:0002020!1.06e-07!34;UBERON:0003528!1.06e-07!34;UBERON:0000062!1.50e-07!511;UBERON:0001893!1.64e-07!34;UBERON:0001950!1.99e-07!20;UBERON:0000468!2.45e-07!659;UBERON:0002791!2.93e-07!33;UBERON:0001017!3.63e-07!82;UBERON:0000153!4.06e-07!129;UBERON:0007811!4.06e-07!129;UBERON:0000475!4.27e-07!365;UBERON:0005743!4.98e-07!86;UBERON:0000956!7.82e-07!25;UBERON:0000203!7.82e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.08e-08;114!UBERON:0007100;2.67e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.21e-28,114;UBERON:0007100,6.19e-08,27;UBERON:0004458,9.70e-07,49 | |||
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|short_description=p1@SCARA5 | |||
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Latest revision as of 20:15, 17 September 2015
Short description: | p1@SCARA5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCARA5_5end |
Coexpression cluster: | C2924_Synoviocyte_large_left_vagina_extraskeletal_eye_retina |
Association with transcript: | 0bp_to_ENST00000301906, ENST00000380385, uc003xgj.2, uc003xgl.2, uc010luz.2_5end |
EntrezGene: | SCARA5 |
HGNC: | 28701 |
UniProt: | Q6ZMJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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adult organism | 1.21e-28 | 114 |
primary circulatory organ | 6.19e-08 | 27 |
body cavity or lining | 9.70e-07 | 49 |