FFCP PHASE1:Hg19::chr16:57679972..57679994,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:57679972..57679994,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_at_chr16:57679972..57679994,+ | |||
|id=chr16:57679972..57679994,+ | |||
|ontology_enrichment_celltype=CL:0000071!7.96e-11!18;CL:0002546!7.96e-11!18;CL:0002621!1.33e-08!3;CL:0002144!1.38e-08!3;CL:0002139!5.68e-08!24;CL:0000076!2.35e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.44e-09;4!CL:0002251;1.52e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.44e-09,4;CL:0002251,1.52e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1!UBERON:0008814;1.27e-17;2!UBERON:0010056;1.27e-17;2 | |||
|ontology_enrichment_disease=DOID:1799!2.50e-07!1;DOID:10165!2.50e-07!1;DOID:1798!2.50e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;5.05e-34;1!DOID:10165;5.05e-34;1!DOID:1798;5.05e-34;1!DOID:1749;2.29e-10;14!DOID:1793;1.44e-09;4!DOID:170;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.05e-34,1;DOID:10165,5.05e-34,1;DOID:1798,5.05e-34,1;DOID:1749,2.29e-10,14;DOID:1793,1.44e-09,4;DOID:170,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.02e-13!4;UBERON:0004785!1.02e-13!4;UBERON:0000487!9.26e-12!22;UBERON:0003729!4.52e-11!5;UBERON:0001986!7.96e-11!18;UBERON:0004638!7.96e-11!18;UBERON:0004852!7.96e-11!18;UBERON:0006914!3.06e-10!25;UBERON:0001949!1.33e-08!3;UBERON:0001915!1.38e-08!3;UBERON:0001982!1.38e-08!3;UBERON:0006122!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.63e-33;4!UBERON:0004785;1.63e-33;4!UBERON:0000974;9.46e-23;6!UBERON:0001723;3.24e-12;3!UBERON:0001033;3.24e-12;3!UBERON:0003729;4.37e-11;13!UBERON:0001987;1.12e-09;4!UBERON:0000161;6.82e-08;19!UBERON:0000166;6.82e-08;19!UBERON:0000344;1.52e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.63e-33,4;UBERON:0004785,1.63e-33,4;UBERON:0000974,4.24e-14,10;UBERON:0001723,3.24e-12,3;UBERON:0001033,3.24e-12,3;UBERON:0010056,3.24e-12,3;UBERON:0003729,4.37e-11,13;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0000344,1.52e-07,20;UBERON:0000166,6.09e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,18.1352180499991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2868775343828,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,2.01771458373847,1.84841065840541,0,0,0,0,0,0,3.40478702825849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.2783632966865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:57679972..57679994,+ | |||
}} |
Latest revision as of 10:38, 25 July 2015
Short description: | p@chr16:57679972..57679994, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57679972..57679994, + |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.44e-09 | 4 |
epithelial cell of alimentary canal | 1.52e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.63e-33 | 4 |
respiratory system mucosa | 1.63e-33 | 4 |
neck | 4.24e-14 | 10 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |
mouth mucosa | 4.37e-11 | 13 |
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |
mucosa | 1.52e-07 | 20 |
oral opening | 6.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.05e-34 | 1 |
endocrine pancreas cancer | 5.05e-34 | 1 |
pancreatic endocrine carcinoma | 5.05e-34 | 1 |
squamous cell carcinoma | 2.29e-10 | 14 |
pancreatic cancer | 1.44e-09 | 4 |
endocrine gland cancer | 8.48e-07 | 6 |