FFCP PHASE1:Hg19::chr16:68798925..68798936,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1748 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-86bp_to_AK311198_5end | |||
|cluster_id=chr16:68798925..68798936,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_CDH1_5end | |||
|id=chr16:68798925..68798936,+ | |||
|ontology_enrichment_celltype=CL:0000764!2.19e-10!2;CL:0000765!2.19e-10!2;CL:0000050!2.19e-10!2;CL:0000038!2.19e-10!2;CL:0000558!2.19e-10!2;CL:0000547!2.19e-10!2;CL:0000549!2.19e-10!2;CL:0000550!2.19e-10!2;CL:0000552!2.19e-10!2;CL:0000453!5.38e-08!5;CL:0000077!1.19e-07!19;CL:0000990!1.36e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.99e-41;2!CL:0000558;3.99e-41;2!CL:0002097;3.89e-11;2!CL:0000174;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.99e-41,2;CL:0000765,3.99e-41,2;CL:0000050,3.99e-41,2;CL:0000038,3.99e-41,2;CL:0000558,3.99e-41,2;CL:0000547,3.99e-41,2;CL:0000549,3.99e-41,2;CL:0000550,3.99e-41,2;CL:0000552,3.99e-41,2;CL:0002097,4.09e-11,2;CL:0000174,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.80e-15!7;UBERON:0002106!1.26e-13!3;UBERON:0004854!1.26e-13!3;UBERON:0009034!1.26e-13!3;UBERON:0002095!1.26e-13!3;UBERON:0004782!1.26e-13!3;UBERON:0003281!1.26e-13!3;UBERON:0009664!1.26e-13!3;UBERON:0002296!1.26e-13!3;UBERON:0005602!1.26e-13!3;UBERON:0001179!1.26e-13!3;UBERON:0006293!1.26e-13!3;UBERON:0000178!3.06e-10!15;UBERON:0000179!3.06e-10!15;UBERON:0000463!3.06e-10!15;UBERON:0007023!5.70e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.52e-33;15!UBERON:0000179;5.52e-33;15!UBERON:0000463;5.52e-33;15!UBERON:0002390;1.47e-21;32!UBERON:0002193;1.73e-14;42!UBERON:0002106;5.93e-08;3!UBERON:0002369;7.50e-08;3!UBERON:0001235;7.50e-08;3!UBERON:0006858;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.90e-33,15;UBERON:0000179,5.90e-33,15;UBERON:0000463,5.90e-33,15;UBERON:0007023,2.61e-08,114;UBERON:0002106,5.93e-08,3;UBERON:0004854,5.93e-08,3;UBERON:0009034,5.93e-08,3;UBERON:0002095,5.93e-08,3;UBERON:0004782,5.93e-08,3;UBERON:0003281,5.93e-08,3;UBERON:0009664,5.93e-08,3;UBERON:0002296,5.93e-08,3;UBERON:0005602,5.93e-08,3;UBERON:0001179,5.93e-08,3;UBERON:0006293,5.93e-08,3;UBERON:0002369,7.76e-08,3;UBERON:0001235,7.76e-08,3;UBERON:0006858,7.76e-08,3;UBERON:0002390,4.13e-07,98;UBERON:0003061,4.13e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6207734622345,12.2874661981703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0,0,1.23408681925858,3.8908398671563,2.16012574895246,2.37937552888281,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0.226705925512272,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,2.29864658627337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0.23806443146374,0.129177819672012,0.31037357147929,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CDH1 | |||
}} |
Latest revision as of 14:11, 17 September 2015
Short description: | p3@CDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDH1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -86bp_to_AK311198_5end |
EntrezGene: | CDH1 |
HGNC: | 1748 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.99e-41 | 2 |
erythroblast | 3.99e-41 | 2 |
megakaryocyte-erythroid progenitor cell | 3.99e-41 | 2 |
erythroid progenitor cell | 3.99e-41 | 2 |
reticulocyte | 3.99e-41 | 2 |
proerythroblast | 3.99e-41 | 2 |
basophilic erythroblast | 3.99e-41 | 2 |
polychromatophilic erythroblast | 3.99e-41 | 2 |
orthochromatic erythroblast | 3.99e-41 | 2 |
cortical cell of adrenal gland | 4.09e-11 | 2 |
steroid hormone secreting cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.90e-33 | 15 |
haemolymphatic fluid | 5.90e-33 | 15 |
organism substance | 5.90e-33 | 15 |
adult organism | 2.61e-08 | 114 |
spleen | 5.93e-08 | 3 |
gastrointestinal system mesentery | 5.93e-08 | 3 |
stomach region | 5.93e-08 | 3 |
mesentery | 5.93e-08 | 3 |
gastrointestinal system serosa | 5.93e-08 | 3 |
mesentery of stomach | 5.93e-08 | 3 |
gut mesentery | 5.93e-08 | 3 |
dorsal mesentery | 5.93e-08 | 3 |
dorsal mesogastrium | 5.93e-08 | 3 |
peritoneal cavity | 5.93e-08 | 3 |
spleen primordium | 5.93e-08 | 3 |
adrenal gland | 7.76e-08 | 3 |
adrenal cortex | 7.76e-08 | 3 |
adrenal/interrenal gland | 7.76e-08 | 3 |
hematopoietic system | 4.13e-07 | 98 |
blood island | 4.13e-07 | 98 |