FFCP PHASE1:Hg19::chr16:85935632..85935645,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:85935632..85935645,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr16:85935632..85935645,+ | |||
|id=chr16:85935632..85935645,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.87e-31!140;CL:0002087!2.48e-29!119;CL:0000037!4.91e-27!172;CL:0000566!4.91e-27!172;CL:0000988!1.21e-26!182;CL:0002031!7.14e-26!124;CL:0002032!4.95e-25!165;CL:0000837!4.95e-25!165;CL:0000945!2.14e-21!24;CL:0000826!2.14e-21!24;CL:0000451!2.99e-17!10;CL:0000542!3.66e-17!53;CL:0000051!3.66e-17!53;CL:0000838!2.40e-15!52;CL:0002194!2.25e-13!63;CL:0000576!2.25e-13!63;CL:0000040!2.25e-13!63;CL:0000559!2.25e-13!63;CL:0000784!2.82e-13!3;CL:0002009!7.57e-13!65;CL:0002057!1.73e-12!42;CL:0000766!5.94e-12!76;CL:0000839!1.16e-11!70;CL:0000860!1.81e-11!45;CL:0000557!1.90e-11!71;CL:0000840!4.88e-11!5;CL:0001029!4.88e-11!5;CL:0000990!5.38e-11!8;CL:0000763!5.95e-10!112;CL:0000049!5.95e-10!112;CL:0000785!1.30e-08!2;CL:0000955!1.30e-08!2;CL:0000818!1.30e-08!2;CL:0000954!1.30e-08!2;CL:0000816!1.30e-08!2;CL:0000134!2.68e-08!358;CL:0002320!5.72e-08!365;CL:0000219!8.10e-07!390;CL:0000236!8.41e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.33e-66;3!CL:0000451;1.32e-18;10!CL:0000945;3.54e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.43e-65,3;CL:0000451,1.58e-18,10;CL:0000945,2.95e-15,24;CL:0000826,2.95e-15,24;CL:0000738,4.34e-10,136;CL:0000037,4.03e-08,168;CL:0000988,1.08e-07,177;CL:0000838,3.07e-07,52;CL:0000542,4.15e-07,53;CL:0000051,4.15e-07,53;CL:0002087,7.66e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.81e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.41e-12!102;UBERON:0003061!1.41e-12!102;UBERON:0002193!3.04e-12!112;UBERON:0002371!9.62e-10!80;UBERON:0002405!1.82e-09!115;UBERON:0001474!8.27e-09!86;UBERON:0002384!3.64e-08!375;UBERON:0004765!5.70e-07!101;UBERON:0001434!5.70e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.21e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-08,3;UBERON:0004854,1.12e-08,3;UBERON:0009034,1.12e-08,3;UBERON:0002095,1.12e-08,3;UBERON:0004782,1.12e-08,3;UBERON:0003281,1.12e-08,3;UBERON:0009664,1.12e-08,3;UBERON:0002296,1.12e-08,3;UBERON:0005602,1.12e-08,3;UBERON:0001179,1.12e-08,3;UBERON:0006293,1.12e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,2.8735206307481,1.65292640758726,0.786728553697808,0,0,0,0,0,0,0.284338464974843,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0.929119112685311,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0.930705723632056,1.19245312152671,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313265848516366,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49911733887393,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p@chr16:85935632..85935645,+ | |||
}} |
Latest revision as of 13:04, 25 July 2015
Short description: | p@chr16:85935632..85935645, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85935632..85935645, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.43e-65 | 3 |
dendritic cell | 1.58e-18 | 10 |
lymphocyte of B lineage | 2.95e-15 | 24 |
pro-B cell | 2.95e-15 | 24 |
leukocyte | 4.34e-10 | 136 |
hematopoietic stem cell | 4.03e-08 | 168 |
hematopoietic cell | 1.08e-07 | 177 |
lymphoid lineage restricted progenitor cell | 3.07e-07 | 52 |
lymphocyte | 4.15e-07 | 53 |
common lymphoid progenitor | 4.15e-07 | 53 |
nongranular leukocyte | 7.66e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.12e-08 | 3 |
gastrointestinal system mesentery | 1.12e-08 | 3 |
stomach region | 1.12e-08 | 3 |
mesentery | 1.12e-08 | 3 |
gastrointestinal system serosa | 1.12e-08 | 3 |
mesentery of stomach | 1.12e-08 | 3 |
gut mesentery | 1.12e-08 | 3 |
dorsal mesentery | 1.12e-08 | 3 |
dorsal mesogastrium | 1.12e-08 | 3 |
peritoneal cavity | 1.12e-08 | 3 |
spleen primordium | 1.12e-08 | 3 |