FFCP PHASE1:Hg19::chr17:47074740..47074752,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28866 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NZI8,C9JT33 | |||
|association_with_transcript=-21bp_to_ENST00000290341,NM_001160423,NM_006546,uc002iom.2,uc010dbj.2_5end | |||
|cluster_id=chr17:47074740..47074752,+ | |||
|coexpression_cluster_id=C2416 | |||
|description=CAGE_peak_4_at_IGF2BP1_5end | |||
|id=chr17:47074740..47074752,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.13e-08!25;CL:0000066!1.43e-07!254;CL:0000039!2.37e-07!7;CL:0000586!2.37e-07!7;CL:0000133!4.19e-07!59;CL:0000095!6.17e-07!17;CL:0000123!6.17e-07!17;CL:0000243!6.29e-07!15;CL:0000125!6.29e-07!15;CL:0000030!6.29e-07!15;CL:0000339!6.29e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.30e-12;7!CL:0000586;2.30e-12;7!CL:0002322;1.37e-10;5!CL:0002321;1.48e-09;15!CL:0000333;8.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.05e-12,7;CL:0000586,2.05e-12,7;CL:0002322,1.39e-10,5;CL:0000066,2.72e-09,253;CL:0000133,3.06e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.49e-08;10!UBERON:0005564;9.49e-08;10 | |||
|ontology_enrichment_disease=DOID:0050687!9.10e-17!143;DOID:14566!2.22e-16!239;DOID:162!2.62e-16!235;DOID:3095!9.19e-13!22;DOID:2994!9.19e-13!22;DOID:305!2.55e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.80e-24;22!DOID:2994;2.80e-24;22!DOID:171;5.20e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.15e-24,22;DOID:2994,2.15e-24,22;DOID:162,6.30e-18,235;DOID:14566,3.58e-17,239;DOID:0050687,4.95e-17,143;DOID:171,5.16e-12,10;DOID:305,2.86e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.01e-09!11;UBERON:0000019!5.86e-08!19;UBERON:0000047!5.86e-08!19;UBERON:0004088!5.86e-08!19;UBERON:0003072!5.86e-08!19;UBERON:0003071!5.86e-08!19;UBERON:0004128!5.86e-08!19;UBERON:0000970!2.55e-07!20;UBERON:0002104!9.52e-07!21;UBERON:0001456!9.52e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;5.73e-13;11!UBERON:0000019;6.27e-10;19!UBERON:0000047;6.27e-10;19!UBERON:0004088;6.27e-10;19!UBERON:0010230;6.27e-10;19!UBERON:0000970;2.69e-09;20!UBERON:0002104;9.99e-09;21!UBERON:0001456;9.99e-09;21!UBERON:0002346;1.25e-08;4!UBERON:0000923;1.25e-08;4!UBERON:0010316;1.25e-08;4!UBERON:0005291;1.25e-08;4!UBERON:0000020;9.70e-08;23!UBERON:0001032;2.61e-07;24!UBERON:0004456;2.61e-07;24!UBERON:0002050;7.40e-07;5!UBERON:0005423;7.40e-07;5!UBERON:0000013;8.97e-07;5!UBERON:0002410;8.97e-07;5!UBERON:0000488;9.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,7.56e-13,11;UBERON:0000019,3.15e-09,20;UBERON:0000047,3.15e-09,20;UBERON:0010312,3.15e-09,20;UBERON:0004088,3.15e-09,20;UBERON:0010230,3.15e-09,20;UBERON:0003072,3.15e-09,20;UBERON:0004128,3.15e-09,20;UBERON:0003071,3.15e-09,20;UBERON:0000970,1.16e-08,21;UBERON:0002104,1.16e-08,21;UBERON:0001456,3.78e-08,22;UBERON:0000020,2.96e-07,24;UBERON:0001032,2.96e-07,24;UBERON:0004456,2.96e-07,24;UBERON:0000488,8.54e-07,4;UBERON:0000013,9.28e-07,5;UBERON:0002410,9.28e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,1.39560233594486,1.52908960491121,1.31883489114227,0,0,0,0,0,0.975865597581014,0.492484232307152,0.816002764977012,0.626909442956176,0.85870796139317,0.136874425072884,1.25542639594803,0.305653622991805,0.492603536699674,0.472264687882075,0,0,0,0,0,0,0.619737604642413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.767175371061182,0,0,0,0,0,1.22895262313288,3.1042115644759,1.58102614247627,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.673588117878509,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0,0,0.468642863667593,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0,0.982674538494144,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.337552664482532,0,0.504867548488229,0,0,0,0.201504196455281,0.169560592310488,0,0,0,14.0269762049035,15.9035721985782,15.2214065159069,10.2624444465217,14.6346093507864,19.7087773900948,0,0,0,0,0,0.946454400318751,1.34867752062481,1.68707720918437,1.10293972732394,0.653638332277218,1.18635309555548,0.674156540800822,0.784885860501384,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,11.6839016615958,1.54411029268673,0,0,0,0.555530670951178,0.977424915930974,0,1.44331342025273,0.811512834825538,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0.51336800074665,0.517086863031111,0,0,0.26593811658487,0,1.28603687131071,0,0.799266537048298,0,0,0,0,0,2.37585561880029,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,1.99267679560631,0.368738337083406,0.0868836144680828,0,0.686286847621712,0,0,0,0,0,1.5119514666484,0,0,0,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0,19.4583713842512,0,0,0.114814448164607,0.182091168006717,0,0.902399225814824,0.462092022626489,0.784349769176855,0,0.844413031143006,0,0.510281115829547,1.29549549661284,0,0.270946437543853,1.00337954770971,0.254876273045038,0,1.56712328305525,0,0,2.05160100093111,3.60816110269676,1.30151357865721,0,0.366277859273374,0.742585499285292,0,0,0,0.48335359146061,0.616194468458578,0.921022048356777,0.413509717453592,0.322260734604821,0.145016693914229,0.681813019328807,1.15741646340759,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.589062011728432,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0.92947049429925,0.281695602532241,1.86434757865267,0.491245205065606,0,0,0,0,0.75894634753143,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48661098735387,0,0.245040215981032,0,0,0,0.797131363644112,0,0,0,0,0,0.912938716132769,2.6635582281414,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,6.6614393599564,0,0,0,3.27673408723686,0,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0,2.01546198283421,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.5772521115589,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0,4.84184199214926,7.36012684160132,4.88913173649036,0,0,0,0,0,0,15.1149092613511,14.9007526081482,15.2717644148017,14.0417762215897,0,1.26598838716816,0,20.4961953579214,4.760550074326,0,0,0.611030144933625,1.18608451472249,2.34771483998355,3.23708043466912,0,0,0,0,0,0,0,0,0.61214552326098,0,5.56196651833622,8.29505531177977,0,0,0,0,5.40758137456606,0,0,0,0,0,0.687944129886466,0.967563312890852,0.950161122120412,0.739039113478883,0,0,0,0.959293472527256,2.98071917554485,0,1.95551382734803,0,0,0.599428828746391,0.576361668616424,2.40526851948423,0,0,0.124252535565433,0.471388069233591,2.17446729717782,3.451893928307,0,5.49006120812886,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.335917362433631,0,4.65983798109815,27.1801978959922,25.0544209478746,23.9282580682356,3.14967940847196,0,0,0,32.3113828414689,39.4738183034061,35.7278690705099,0,0,0,0,0,0,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.79318464064088,0,0,0,0,1.53978154095896,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,2.66991963625398,0,0,0,0,0,0,15.7717443827303,0.124980407962107,0.758245587708239,0.856396000634902,0.470531639396343,0,1.88397337194073,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.800055529326307,0,0,0,2.31143796488764,0,1.30497145982606,0.226705925512272,0.926089897295336,2.69210374957114,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,3.27609848846413,0,0,0,0.213383459388282,0,0,0,0,0,6.13892982257528,0,21.3881680924019,7.20783612067292,4.92224336866673,14.2425196468128,13.1371910114542,5.02780426175919,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.294443155503077,2.12345502025933,0.183428598521679,0,0,3.4517996303005,1.19349733269765,0,1.0085253435176,0,8.90482761236836,0,0,0,0,0,0,0,0,0,17.4112531916024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68163297988273,0.913158720509496,0,0,0,10.7449255978254,2.67355278346688,6.08503953059028,0,0,0,0,0,0.946656005844523,0.596493833314104,0,0,0,0,1.4541206133713,0,0,0,0,1.1598144313382,0,0,0.397901550322736,2.37840181555137,0.11294608203896,22.3179248993221,0.301925687133347,0,0.437119121007915,0,0,0,0,0,0,0,0,0.193373663920732,0,2.67830907908486,0.352894871715692,0,0,0,0,3.62874593044325,0,0,0,0,0,0,8.83164973845552,3.82429501872934,3.67425652933167,3.3656313814854,12.8264354527469,1.56221329209236,2.005660314339,0.378893491091197,1.87574891109325,0,0,0,0,0,0.682821857254437,0,0,0,0,0,0,0,0,0,4.1623664892309,0,0,0,0,0,0,0,0 | |||
|short_description=p4@IGF2BP1 | |||
}} |
Latest revision as of 19:39, 15 September 2015
Short description: | p4@IGF2BP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IGF2BP1_5end |
Coexpression cluster: | C2416_peripheral_iPS_hepatocellular_carcinoid_small_colon_HES3GFP |
Association with transcript: | -21bp_to_ENST00000290341, NM_001160423, NM_006546, uc002iom.2, uc010dbj.2_5end |
EntrezGene: | IGF2BP1 |
HGNC: | 28866 |
UniProt: | Q9NZI8C9JT33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.05e-12 | 7 |
germ cell | 2.05e-12 | 7 |
embryonic stem cell | 1.39e-10 | 5 |
epithelial cell | 2.72e-09 | 253 |
neurectodermal cell | 3.06e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 7.56e-13 | 11 |
camera-type eye | 3.15e-09 | 20 |
simple eye | 3.15e-09 | 20 |
immature eye | 3.15e-09 | 20 |
ocular region | 3.15e-09 | 20 |
eyeball of camera-type eye | 3.15e-09 | 20 |
optic cup | 3.15e-09 | 20 |
optic vesicle | 3.15e-09 | 20 |
eye primordium | 3.15e-09 | 20 |
eye | 1.16e-08 | 21 |
visual system | 1.16e-08 | 21 |
face | 3.78e-08 | 22 |
sense organ | 2.96e-07 | 24 |
sensory system | 2.96e-07 | 24 |
entire sense organ system | 2.96e-07 | 24 |
atypical epithelium | 8.54e-07 | 4 |
sympathetic nervous system | 9.28e-07 | 5 |
autonomic nervous system | 9.28e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.15e-24 | 22 |
germ cell cancer | 2.15e-24 | 22 |
cancer | 6.30e-18 | 235 |
disease of cellular proliferation | 3.58e-17 | 239 |
cell type cancer | 4.95e-17 | 143 |
neuroectodermal tumor | 5.16e-12 | 10 |
carcinoma | 2.86e-09 | 106 |