FFCP PHASE1:Hg19::chr19:40730820..40730844,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79935 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25805 | |||
|TSSclassifier=strong | |||
|UniProt=D6RCS3 | |||
|association_with_transcript=0bp_to_ENST00000513948_5end | |||
|cluster_id=chr19:40730820..40730844,- | |||
|description=CAGE_peak_2_at_CNTD2_5end | |||
|id=chr19:40730820..40730844,- | |||
|ontology_enrichment_celltype=CL:0000066!2.01e-14!254;CL:0000575!1.06e-10!2;CL:0002159!4.02e-09!13;CL:0002368!5.40e-09!13;CL:0000082!1.72e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.60e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.60e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.32e-13;13 | |||
|ontology_enrichment_disease=DOID:305!6.98e-15!106;DOID:0050687!3.28e-12!143;DOID:3493!7.59e-11!2;DOID:1749!3.93e-08!14;DOID:1324!9.49e-08!15;DOID:0050615!3.02e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.66e-21;2!DOID:299;2.20e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.66e-21,2;DOID:299,2.20e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005178!7.88e-10!34;UBERON:0002224!7.88e-10!34;UBERON:0005181!1.67e-09!35;UBERON:0000065!1.31e-08!53;UBERON:0008947!1.57e-08!38;UBERON:0003258!1.57e-08!38;UBERON:0004802!1.72e-08!19;UBERON:0000115!1.72e-08!19;UBERON:0005157!2.06e-07!51;UBERON:0002048!3.02e-07!22;UBERON:0000117!3.02e-07!22;UBERON:0000171!3.02e-07!22;UBERON:0000170!3.02e-07!22;UBERON:0005597!3.02e-07!22;UBERON:0000118!3.02e-07!22;UBERON:0000072!8.74e-07!46;UBERON:0002294!8.93e-07!7;UBERON:0001173!8.93e-07!7;UBERON:0004912!8.93e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;2.80e-11;4!UBERON:0003928;2.80e-11;4!UBERON:0000945;2.97e-09;5!UBERON:0010039;2.97e-09;5!UBERON:0002423;2.39e-07;25!UBERON:0002294;5.38e-07;7!UBERON:0001173;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,3.27e-08,22;UBERON:0003894,3.27e-08,22;UBERON:0002394,5.92e-08,6;UBERON:0003928,5.92e-08,6;UBERON:0009854,6.75e-08,23;UBERON:0007499,2.43e-07,25;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0009856,4.28e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79560539918633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.33986816169998,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0.472775363535873,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,1.17241786942466,0,0,0,0.513260513652988,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63155864376399,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CNTD2 | |||
}} |
Latest revision as of 01:22, 18 September 2015
Short description: | p2@CNTD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNTD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000513948_5end |
EntrezGene: | CNTD2 |
HGNC: | 25805 |
UniProt: | D6RCS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 3.27e-08 | 22 |
liver primordium | 3.27e-08 | 22 |
bile duct | 5.92e-08 | 6 |
digestive system duct | 5.92e-08 | 6 |
digestive tract diverticulum | 6.75e-08 | 23 |
epithelial sac | 2.43e-07 | 25 |
epithelium of foregut-midgut junction | 2.43e-07 | 25 |
anatomical boundary | 2.43e-07 | 25 |
hepatobiliary system | 2.43e-07 | 25 |
foregut-midgut junction | 2.43e-07 | 25 |
septum transversum | 2.43e-07 | 25 |
sac | 4.28e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.66e-21 | 2 |
adenocarcinoma | 2.20e-07 | 25 |