FFCP PHASE1:Hg19::chr19:48000730..48000746,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7641 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-377bp_to_AK126519_5end | |||
|cluster_id=chr19:48000730..48000746,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_NAPA_5end | |||
|id=chr19:48000730..48000746,- | |||
|ontology_enrichment_celltype=CL:0000764!3.61e-15!2;CL:0000765!3.61e-15!2;CL:0000050!3.61e-15!2;CL:0000038!3.61e-15!2;CL:0000558!3.61e-15!2;CL:0000547!3.61e-15!2;CL:0000549!3.61e-15!2;CL:0000550!3.61e-15!2;CL:0000552!3.61e-15!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.52e-36;2!CL:0000558;3.52e-36;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.52e-36,2;CL:0000765,3.52e-36,2;CL:0000050,3.52e-36,2;CL:0000038,3.52e-36,2;CL:0000558,3.52e-36,2;CL:0000547,3.52e-36,2;CL:0000549,3.52e-36,2;CL:0000550,3.52e-36,2;CL:0000552,3.52e-36,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!6.24e-08!1;DOID:4549!6.24e-08!1;DOID:5861!6.24e-08!1;DOID:6496!6.24e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.99e-46!15;UBERON:0000179!3.99e-46!15;UBERON:0000463!3.99e-46!15;UBERON:0007023!2.75e-14!115;UBERON:0002363!4.72e-08!1;UBERON:0007647!4.72e-08!1;UBERON:0010115!4.72e-08!1;UBERON:0006834!5.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-96;15!UBERON:0000179;2.34e-96;15!UBERON:0000463;2.34e-96;15!UBERON:0002390;3.46e-41;32!UBERON:0002193;7.09e-23;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.34e-96,15;UBERON:0000179,2.34e-96,15;UBERON:0000463,2.34e-96,15;UBERON:0007023,1.73e-18,114;UBERON:0002390,2.90e-14,98;UBERON:0003061,2.90e-14,98;UBERON:0004535,6.65e-13,109;UBERON:0002193,6.65e-13,108;UBERON:0001009,1.53e-12,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,2.3529190592241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,27.4021708985371,43.5843208071154,22.7858874869665,10.4821981201427,15.2204041041892,42.7992385387193,38.8822634811443,38.070008462125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7638164642858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@NAPA | |||
}} |
Latest revision as of 00:13, 19 September 2015
Short description: | p5@NAPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NAPA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -377bp_to_AK126519_5end |
EntrezGene: | NAPA |
HGNC: | 7641 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.52e-36 | 2 |
erythroblast | 3.52e-36 | 2 |
megakaryocyte-erythroid progenitor cell | 3.52e-36 | 2 |
erythroid progenitor cell | 3.52e-36 | 2 |
reticulocyte | 3.52e-36 | 2 |
proerythroblast | 3.52e-36 | 2 |
basophilic erythroblast | 3.52e-36 | 2 |
polychromatophilic erythroblast | 3.52e-36 | 2 |
orthochromatic erythroblast | 3.52e-36 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.34e-96 | 15 |
haemolymphatic fluid | 2.34e-96 | 15 |
organism substance | 2.34e-96 | 15 |
adult organism | 1.73e-18 | 114 |
hematopoietic system | 2.90e-14 | 98 |
blood island | 2.90e-14 | 98 |
cardiovascular system | 6.65e-13 | 109 |
hemolymphoid system | 6.65e-13 | 108 |
circulatory system | 1.53e-12 | 112 |