FFCP PHASE1:Hg19::chr1:192605252..192605295,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6003 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9995 | |||
|TSSclassifier=strong | |||
|UniProt=O14921 | |||
|association_with_transcript=0bp_to_ENST00000391995,ENST00000462955,ENST00000543215,NM_002927,NM_144766,uc001gsj.2,uc001gsk.2_5end | |||
|cluster_id=chr1:192605252..192605295,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_RGS13_5end | |||
|id=chr1:192605252..192605295,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.95e-14!24;CL:0000826!2.95e-14!24;CL:0000236!1.23e-11!14;CL:0002274!2.64e-11!5;CL:0000457!2.64e-11!5;CL:0002191!2.64e-11!5;CL:0000097!2.64e-11!5;CL:0000831!2.64e-11!5;CL:0002028!2.64e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.40e-25;5!CL:0000163;9.31e-14;9!CL:0000945;8.73e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.42e-25,5;CL:0002028,5.42e-25,5;CL:0000163,9.33e-14,9;CL:0000945,7.87e-09,24;CL:0000826,7.87e-09,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.62e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.42e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-30!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.70e-10,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,2.36018566109342,0,0,0,0,0,108.221679210681,216.66591031083,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18455444504853,0.889509253863555,0.426730222566507,0,2.87376219977242,1.98313461835459,0.954053754535364,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99633954338929,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,678.397278582714,168.260557399275,603.946800570269,585.703490686531,528.955796056532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,19.6951365633262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.61158997199083,0,1.5602073798847,0,0,0,0,0,0,0,0,0,0.597743964753209,50.8362404577312,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07765697960252,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0,0,2.29989667708682,0.611030144933625,0,0,0,0,0,0,0.364909578431332,0,0,0.789168805698781,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0.171986032471617,0,0,0,0.775912131907355,1.588610280447,0,0,0,0,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0.592713324460491,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,2.56289790162467,1.10043013569766,2.89967338743037,1.9846640872478,0,390.588863007533,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,13.4967714612067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,0,9.56442096712968,0.857440047187092,0.0679697329768317,0,0,0,3.29670989972159,0,0,0,0,0,0.285906176706625,0,24.5269407526744,0.173858272302579,0,0,0,0,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,1.94284397223656,0,0,0,0,0,0,5.7108876999879,0.218559560503957,0,1.71603825227734,0,0,0,0,0,1.2217909337381,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0,2.77204176471275,0,0.516711278688049,0.186224142887574,0,0.190941474834495,0.404234377916439,0.870866991587845,1.71116650542641,17.5788858368073,1.43444410785353,0,0,0,0,0,0,1.22241444182866,0,0.665756774185513,1.00636896795513,0 | |||
|short_description=p1@RGS13 | |||
}} |
Latest revision as of 10:21, 19 September 2015
Short description: | p1@RGS13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS13_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_ENST00000391995, ENST00000462955, ENST00000543215, NM_002927, NM_144766, uc001gsj.2, uc001gsk.2_5end |
EntrezGene: | RGS13 |
HGNC: | 9995 |
UniProt: | O14921 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.42e-25 | 5 |
basophil mast progenitor cell | 5.42e-25 | 5 |
endocrine cell | 9.33e-14 | 9 |
lymphocyte of B lineage | 7.87e-09 | 24 |
pro-B cell | 7.87e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.70e-10 | 114 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.42e-08 | 10 |