FFCP PHASE1:Hg19::chr1:203830938..203831001,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11161 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000469451_5end | |||
|cluster_id=chr1:203830938..203831001,+ | |||
|coexpression_cluster_id=C2551 | |||
|description=CAGE_peak_3_at_SNRPE_5end | |||
|id=chr1:203830938..203831001,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.79e-15!254;CL:0002321!2.03e-13!248;CL:0000220!1.04e-12!246;CL:0000548!6.28e-10!679;CL:0000004!6.28e-10!679;CL:0000255!6.28e-10!679;CL:0000012!8.72e-10!682;CL:0002319!5.00e-09!25;CL:0000133!8.66e-09!59;CL:0000333!1.08e-07!41;CL:0000221!2.45e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.42e-09;25!CL:0002321;3.55e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.37e-12,253;CL:0002321,1.67e-10,250;CL:0002319,1.98e-09,25;CL:0000133,2.15e-08,59;CL:0000333,6.57e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.29e-41!235;DOID:14566!2.69e-40!239;DOID:0050687!4.15e-20!143;DOID:0050686!6.93e-19!137;DOID:305!9.48e-15!106;DOID:2531!4.33e-14!51;DOID:0060083!4.33e-14!51;DOID:1240!1.23e-12!39;DOID:8692!1.05e-10!31;DOID:3095!6.14e-08!22;DOID:2994!6.14e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.13e-11;31!DOID:1240;2.86e-11;39!DOID:2531;5.23e-10;51!DOID:0060083;5.23e-10;51!DOID:3095;2.44e-07;22!DOID:2994;2.44e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.02e-38,235;DOID:14566,5.02e-37,239;DOID:0050687,3.21e-17,143;DOID:0050686,5.42e-17,137;DOID:2531,1.60e-15,51;DOID:0060083,1.60e-15,51;DOID:1240,3.04e-14,39;DOID:305,7.14e-13,106;DOID:8692,3.92e-12,31;DOID:3095,1.24e-07,22;DOID:2994,1.24e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.26e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.33e-08;9!UBERON:0001557;5.33e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.11e-08,9 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.704772020479856,1.0007329835313,0,0.872338524100369,0,0,0,4.66894479352867,14.653824527421,1.74753097704138,0,1.11389717664042,0.662794751455832,2.6893005858071,2.41077811209591,2.92124036154949,1.46379839637152,4.92484232307152,4.08001382488506,1.88072832886853,7.44213566540748,8.34933992944594,5.77496142136093,2.21598876669059,2.29881650459848,2.99100968991981,0,0,0.154816123316076,1.83884244895785,0.30120591877825,0.369754010166788,4.5705648342378,1.9903692548239,3.22960483268332,0,0,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,0,0.755751887377619,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,3.16060901730092,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0,0,0,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0.14828656316206,0,0,0.679856056185397,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,2.68511379871414,0.722878304769133,0.50133791063589,0.434539556882471,0.795285947051099,0,4.44313640671119,2.66075276955077,4.3917392846563,0.654895377488563,0.728590576585084,1.48313777113772,0.324547393654683,0.348259474598534,0,0,0,0.371457501329565,1.78886166630035,2.58070378531837,1.38856200643038,0.56530794192401,0.838998872419812,2.75118041940067,1.67195973229448,0.775250277507987,2.49036383880697,1.00416183829401,1.61131726843659,0.760272105718513,0,3.30896772311282,2.43042584364528,3.21479021822687,2.2452937262617,2.92789849256638,6.13266549863533,0.949265659568129,2.93122790288652,0,0,1.74437620857014,0.496971951695318,2.27934920996244,0.397227542439656,0.860509862246441,2.83734705758686,0,0,2.71334303258876,0.622422070799533,1.34710672069688,2.61539044981534,1.05950199351452,0,2.10889288650417,0.936480230490962,1.1409436430889,0.896692083310806,5.75429043354448,5.6655530528846,5.19667984798319,0.816616685019573,6.5102188175237,0.309977343527296,1.18800285728205,0.741800787835671,2.73048408581408,1.43723628363248,6.39677233025452,4.25402967564678,1.6623846929051,1.31693286264251,1.22595118319608,0.600952235626387,6.91936317276128,0.179389635688862,0.427114777637135,1.27159140695737,0.600182192168805,1.23663035086127,0,0.37223371266318,0.337552664482532,1.46155507741798,0.757301322732344,0.644349290496095,0.484938170456436,0,1.81353776809752,3.39121184620975,1.15956511897978,1.90922284413584,2.00763216772303,13.2951339681259,12.0602089172552,11.0384245726042,9.74413917144482,10.5974757367764,14.964071722109,3.12899064659632,0,1.38134921352481,0.464367928031979,0,15.3798840051797,16.521299627654,16.6297610619603,17.3161537189858,15.6873199746532,18.2698376715544,15.1011065139384,14.5203884192756,20.3915993181587,2.21446636387394,1.40241773803446,0,1.47008711385542,1.26755034821831,1.96565443335525,1.18157981336281,5.73902029239046,2.95172252503473,4.80389868835872,0.878002283269004,0,2.41269533787914,0.833296006426766,0.651616610620649,2.07986957055916,8.6598805215164,4.40535538905292,1.17408694235822,1.15493158208859,0.925971025153221,2.66355813128438,0,0.858486162094873,0.984868024349589,0.234004265139238,1.78357394746474,6.56136837907439,2.01578553838631,2.97727704209012,2.86587272649115,1.45316969256981,0,0.492663237895943,0,0.207328115540772,0,0,3.23839260890062,0.763976851116555,0,0,3.496134751913,4.20480280981484,1.42913216315289,2.35475277125258,3.92364061949952,5.5737097223922,0.387815147273333,0,1.690605505112,1.32969058292435,0,2.82928111688356,5.67396528093113,3.72991050622539,1.57275793023962,0.542621605391443,8.23240336780769,1.62868092146868,1.06617584622764,3.95975936466715,1.20575750823834,2.61460037580088,0.99972991182057,0,0.502257091432126,0,1.67737398844108,0,5.70547620162874,2.31650090668127,2.05476322550383,2.68591444859843,3.02629888782524,0,0,0,1.52456774533478,2.60279707715243,6.95959931499926,4.69045542936177,3.82763250991898,0,0,0,0.858840442033979,1.00034104211935,1.08506009479894,0.415941723061614,0.535286966391485,0.630809660135739,0.585707074963566,0.902838299183157,0,0,0.664225598535437,2.58116835958384,1.99832313276591,0.587403472388222,2.74514739048685,0.206768026122887,0,0.106727557803444,1.81876542867756,4.99306318531491,4.5358543999452,0,0.306923946576125,1.96462066103151,0.768834895534206,1.02341449813341,1.28683136914886,1.48418066444991,4.93471020168498,3.01854933032316,3.77784917663522,2.07701771673448,3.1376802184189,3.98836183652353,1.00253235151642,0.460404944679482,2.64073230778596,4.00600569614778,1.57349297951309,1.35359883872224,1.92538342761037,3.92174884588428,2.92278449306521,2.21658420675039,2.27466768141793,2.55140557914773,3.23873874153209,0,1.62567862526312,1.50506932156456,1.78413391131527,1.66215201785745,2.91037181138832,2.41185864310528,0.784306353074702,6.41125312790973,3.280146456997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| |||
|short_description=p3@SNRPE | |||
}} |
Latest revision as of 00:05, 20 September 2015
Short description: | p3@SNRPE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNRPE_5end |
Coexpression cluster: | C2551_nonsmall_neuroblastoma_retinoblastoma_carcinoid_Reticulocytes_non_mesothelioma |
Association with transcript: | 0bp_to_ENST00000469451_5end |
EntrezGene: | SNRPE |
HGNC: | 11161 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.37e-12 | 253 |
embryonic cell | 1.67e-10 | 250 |
neural cell | 1.98e-09 | 25 |
neurectodermal cell | 2.15e-08 | 59 |
migratory neural crest cell | 6.57e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.11e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.02e-38 | 235 |
disease of cellular proliferation | 5.02e-37 | 239 |
cell type cancer | 3.21e-17 | 143 |
organ system cancer | 5.42e-17 | 137 |
hematologic cancer | 1.60e-15 | 51 |
immune system cancer | 1.60e-15 | 51 |
leukemia | 3.04e-14 | 39 |
carcinoma | 7.14e-13 | 106 |
myeloid leukemia | 3.92e-12 | 31 |
germ cell and embryonal cancer | 1.24e-07 | 22 |
germ cell cancer | 1.24e-07 | 22 |