FFCP PHASE1:Hg19::chr1:205320727..205320729,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:205320727..205320729,- | |||
|description=CAGE_peak_at_chr1:205320727..205320729,- | |||
|id=chr1:205320727..205320729,- | |||
|ontology_enrichment_celltype=CL:0002605!4.17e-16!3;CL:0002319!1.84e-11!25;CL:0000133!2.09e-08!59;CL:0000128!3.51e-07!7;CL:0000126!3.51e-07!7;CL:0000127!3.51e-07!7;CL:0002453!3.51e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2!CL:0000333;3.10e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.38e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.56e-26!82;UBERON:0001049!1.16e-25!57;UBERON:0005068!1.16e-25!57;UBERON:0006241!1.16e-25!57;UBERON:0007135!1.16e-25!57;UBERON:0002780!2.83e-25!41;UBERON:0001890!2.83e-25!41;UBERON:0006240!2.83e-25!41;UBERON:0003080!1.30e-24!42;UBERON:0005743!1.88e-24!86;UBERON:0000073!4.23e-24!94;UBERON:0001016!4.23e-24!94;UBERON:0003296!2.03e-22!4;UBERON:0010133!2.03e-22!4;UBERON:0002616!8.77e-22!59;UBERON:0000955!3.40e-20!69;UBERON:0006238!3.40e-20!69;UBERON:0003056!2.22e-18!61;UBERON:0003075!9.93e-18!86;UBERON:0007284!9.93e-18!86;UBERON:0002346!9.12e-17!90;UBERON:0002791!1.31e-16!33;UBERON:0002020!3.60e-16!34;UBERON:0003528!3.60e-16!34;UBERON:0001893!4.49e-16!34;UBERON:0004121!2.08e-15!169;UBERON:0000924!6.25e-15!173;UBERON:0006601!6.25e-15!173;UBERON:0000153!1.09e-14!129;UBERON:0007811!1.09e-14!129;UBERON:0001869!3.10e-14!32;UBERON:0000033!4.96e-14!123;UBERON:0001894!7.12e-13!7;UBERON:0006222!7.12e-13!7;UBERON:0000007!3.56e-12!2;UBERON:0001905!5.22e-12!2;UBERON:0002757!5.22e-12!2;UBERON:0010134!5.22e-12!2;UBERON:0002784!5.22e-12!2;UBERON:0005408!5.22e-12!2;UBERON:0001899!5.22e-12!2;UBERON:0000956!6.18e-12!25;UBERON:0000203!6.18e-12!25;UBERON:0005383!7.20e-08!3;UBERON:0005382!7.20e-08!3;UBERON:0000988!7.72e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;3.10e-11;5!UBERON:0002021;3.10e-11;5!UBERON:0000013;3.10e-11;5!UBERON:0002410;3.10e-11;5!UBERON:0001950;1.69e-10;20!UBERON:0002619;1.12e-09;22!UBERON:0001016;6.00e-09;83!UBERON:0000956;1.11e-08;25!UBERON:0000203;1.11e-08;25!UBERON:0000010;8.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.66e-11,5;UBERON:0000013,2.94e-11,5;UBERON:0002410,2.94e-11,5;UBERON:0002021,3.26e-11,5;UBERON:0001950,1.61e-10,20;UBERON:0002619,1.07e-09,22;UBERON:0001016,1.88e-09,89;UBERON:0000956,1.07e-08,25;UBERON:0000203,1.07e-08,25;UBERON:0002791,4.60e-07,32;UBERON:0001869,4.60e-07,32;UBERON:0000010,7.91e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29389773676018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26035848110859,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64092442705466,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.455324382702595,0,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:205320727..205320729,- | |||
}} |
Latest revision as of 02:46, 28 July 2015
Short description: | p@chr1:205320727..205320729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:205320727..205320729, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.66e-11 | 5 |
sympathetic nervous system | 2.94e-11 | 5 |
autonomic nervous system | 2.94e-11 | 5 |
occipital lobe | 3.26e-11 | 5 |
neocortex | 1.61e-10 | 20 |
regional part of cerebral cortex | 1.07e-09 | 22 |
nervous system | 1.88e-09 | 89 |
cerebral cortex | 1.07e-08 | 25 |
pallium | 1.07e-08 | 25 |
regional part of telencephalon | 4.60e-07 | 32 |
cerebral hemisphere | 4.60e-07 | 32 |
peripheral nervous system | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.32e-09 | 6 |