FFCP PHASE1:Hg19::chr1:208322943..208322955,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:208322943..208322955,- | |||
|coexpression_cluster_id=C1847 | |||
|description=CAGE_peak_at_chr1:208322943..208322955,- | |||
|id=chr1:208322943..208322955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.48e-10;2!UBERON:0006215;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.57e-30!57;UBERON:0005068!2.57e-30!57;UBERON:0006241!2.57e-30!57;UBERON:0007135!2.57e-30!57;UBERON:0002780!4.37e-26!41;UBERON:0001890!4.37e-26!41;UBERON:0006240!4.37e-26!41;UBERON:0002616!1.18e-25!59;UBERON:0003080!3.25e-25!42;UBERON:0001017!2.69e-24!82;UBERON:0000955!3.99e-24!69;UBERON:0006238!3.99e-24!69;UBERON:0005743!1.18e-23!86;UBERON:0000073!4.31e-22!94;UBERON:0001016!4.31e-22!94;UBERON:0007023!6.40e-21!115;UBERON:0003075!8.31e-21!86;UBERON:0007284!8.31e-21!86;UBERON:0002020!2.96e-20!34;UBERON:0003528!2.96e-20!34;UBERON:0001893!3.62e-20!34;UBERON:0001869!3.68e-20!32;UBERON:0002791!1.91e-19!33;UBERON:0002346!3.11e-19!90;UBERON:0003056!1.14e-17!61;UBERON:0000033!3.04e-16!123;UBERON:0000956!5.05e-15!25;UBERON:0000203!5.05e-15!25;UBERON:0000153!9.19e-15!129;UBERON:0007811!9.19e-15!129;UBERON:0004121!4.86e-13!169;UBERON:0000025!1.08e-12!194;UBERON:0002619!1.81e-12!22;UBERON:0000924!2.38e-12!173;UBERON:0006601!2.38e-12!173;UBERON:0001950!3.68e-12!20;UBERON:0004111!8.05e-12!241;UBERON:0000477!3.74e-10!286;UBERON:0000119!1.09e-08!312;UBERON:0000483!1.34e-08!309;UBERON:0001894!1.49e-07!7;UBERON:0006222!1.49e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.48e-10;2!UBERON:0001873;2.48e-10;2!UBERON:0002757;2.48e-10;2!UBERON:0010134;2.48e-10;2!UBERON:0005408;2.48e-10;2!UBERON:0001899;2.48e-10;2!UBERON:0002114;2.63e-07;2!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.72e-10,2;UBERON:0010122,1.72e-10,2;UBERON:0001905,3.58e-10,2;UBERON:0002757,3.58e-10,2;UBERON:0010134,3.58e-10,2;UBERON:0005408,3.58e-10,2;UBERON:0001899,3.58e-10,2;UBERON:0005383,2.05e-07,3;UBERON:0005382,2.05e-07,3;UBERON:0002114,2.97e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0.257640540045629,0,0.506328996723799,0,0.757301322732344,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0.925971025153221,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.255679882248303,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0.503865495708552,0.102268682502155,0,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,1.77148277162768,0.361789315876224,0,2.32216445855572,0.886642856860642,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.126621591911757,0.782205530939212,0,0.426905989478705,0,0.288180834308212,0,6.52060991875465,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.544813624446302,0,0,0,0,0.77380195455795,0.182248669974074,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0.285465333544967,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0.504143392443436,0.0691572524642179,0.807378228159255,0,0.196295437002051,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0.135075169236789,1.56215619722769,0.413373593002368,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0.535701835878287,1.00885116665647,0.606965604236632,0.227662191351298,0,0,0,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0,0,1.24329698497822,0.51215543128185,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,0,0.940634592723046,0.735444965261716,0,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,1.0580536810308,0,0,0,0,0,1.0135880080915,0,0,0.0918948995348449,0,0.0757786982182394,0,0.829169439458779,0.413731983447581,0,0,0,0,0.224263725161227,0,0.606351566874658,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:208322943..208322955,- | |||
}} |
Latest revision as of 03:14, 28 July 2015
Short description: | p@chr1:208322943..208322955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:208322943..208322955, - |
Coexpression cluster: | C1847_gastrointestinal_cerebellum_parietal_middle_salivary_acute_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.72e-10 | 2 |
future caudate nucleus | 1.72e-10 | 2 |
pineal body | 3.58e-10 | 2 |
regional part of epithalamus | 3.58e-10 | 2 |
secretory circumventricular organ | 3.58e-10 | 2 |
circumventricular organ | 3.58e-10 | 2 |
epithalamus | 3.58e-10 | 2 |
caudate-putamen | 2.05e-07 | 3 |
dorsal striatum | 2.05e-07 | 3 |
duodenum | 2.97e-07 | 2 |