FFCP PHASE1:Hg19::chr1:214814697..214814711,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:214814697..214814711,+ | |||
|coexpression_cluster_id=C523 | |||
|description=CAGE_peak_at_chr1:214814697..214814711,+ | |||
|id=chr1:214814697..214814711,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.15e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.49e-09;25!CL:0000095;8.45e-08;17!CL:0000077;6.74e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.72e-09,25;CL:0000095,1.21e-07,17;CL:0000123,1.21e-07,17;CL:0000077,6.22e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.56e-07;29 | |||
|ontology_enrichment_disease=DOID:14566!2.44e-53!239;DOID:162!3.19e-52!235;DOID:0050687!1.25e-25!143;DOID:0050686!8.74e-22!137;DOID:305!5.84e-18!106;DOID:2531!1.69e-17!51;DOID:0060083!1.69e-17!51;DOID:1240!9.68e-13!39;DOID:8692!8.34e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.39e-11;39!DOID:2531;2.13e-10;51!DOID:0060083;2.13e-10;51!DOID:8692;8.45e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.84e-35,235;DOID:14566,7.59e-35,239;DOID:2531,2.35e-15,51;DOID:0060083,2.35e-15,51;DOID:0050686,2.50e-15,137;DOID:0050687,3.33e-15,143;DOID:1240,3.80e-13,39;DOID:305,1.18e-09,106;DOID:8692,5.82e-08,31;DOID:1325,6.75e-07,7;DOID:3904,6.75e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.59e-09;9!UBERON:0001557;9.59e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.76e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,1.43117993565528,3.14811177667634,1.38096903554283,1.60468152070698,2.38091709404843,1.18066171970519,0,0,0,0,0,0,0.852139206383318,0.710846162437108,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.589211814949674,0,0.270803863765016,0.25618263945135,0.520237390239513,0.986627427622057,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0,0.945348171640679,0.665188192387692,0.87834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,0,0.625098097988558,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.633152558322899,0,1.43418310374407,1.77334191099179,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0,0,1.59684612505298,0,0,0.494533858557114,0,0,1.34668891163253,1.00094815897571,0.277064115484183,0,0,0,1.02088964844019,1.97328599257748,0.213557388818567,0.423863802319124,1.20036438433761,0,0.515281080091258,0.37223371266318,1.35021065793013,0,1.26216887122057,0,0,0.710019185033229,0.503760491138201,0.169560592310488,0,0,0,0.975789649036763,1.32529768321485,2.09149097165133,1.86589899027667,2.01856680700503,3.28479623168247,0,1.28648187638577,0,0,0,2.24782920075703,1.18009283054671,1.92808823906786,2.20587945464788,0.653638332277218,1.42362371466658,1.8876383142423,2.35465758150415,1.15424147083917,0,0,0,0,0,0,0,2.20731549707325,0.491953754172454,0.171567810298526,0,0,1.20634766893957,0.370353780634118,0,0,0,0.463721619900307,0,0,0.462985512576611,1.33177906564219,0,0,0.246217006087397,0,0.148631162288728,0,0.503946384596579,0.141775097242386,1.16426079513703,0.581267877027924,0,0,0.176096868026452,0,0,0,0.698476837213859,0,0,0,0.411309970813294,1.20137223137567,0.571652865261156,0,0,0.95339771567235,0,0,1.690605505112,0,0,0.257207374262142,0,0,0.142977993658148,0,0,1.30294473717494,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,1.14861935834114,0,0.434343920002738,0.61642896765115,1.25342674267927,1.68127715990291,0.591092280605782,0,0.385029108839245,0,0,1.54657762555539,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.892144943985809,0.315404830067869,0.468565659970853,0,0,0,1.32845119707087,0.184369168541703,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.616838775210622,0.177561725313127,0.164254312027618,0,0.232420756919918,0.725156697549733,0,0,0.803701137152247,2.1850940160806,0.131124414959424,0,0.462092022626489,0,1.46139224653261,1.16106791782163,0,0,2.37507507712353,0,0,0,0,0,0,1.97333888981341,1.5686127061494,0.256450125116389,0,0.325378394664303,0,3.11336180382368,1.15513299888823,0,0,0,0.386682873168488,0.462145851343933,0.460511024178389,0.413509717453592,0.322260734604821,0.580066775656914,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.717056761020258,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,3.92064345569651,4.64507937814297,1.00988449083511,1.35169502361987,2.23196781820351,2.99369057149225,0.191505370132367,0.635020748171649,1.94773164164733,1.12318871245384,2.9670508274315,2.6635582281414,0,1.35433422241283,3.05117342697029,3.22879531505676,0,0.343505344755765,0,1.56573275524691,0.500547425135725,3.71237381263877,1.67043704337145,1.23087398947712,0.811367035427949,0.66614393599564,0,0.561421621224659,0,0.242721043499027,0.66866030566487,2.55722532125772,0,0,0,0,0,0,2.30725423917463,2.11125408127993,0,0,1.0077309914171,0.818149460017238,0.492339221844278,0.311039587661807,0.988551862620595,0,1.53471711068062,0,0,0,0,0,0,0,0.349839999984783,0,0.796554137998498,1.5255219017566,1.18193840883968,2.41320361269025,0.583209226766509,3.47249989866585,0,0,0,0,0,0,0.21787692703798,0.41827123283581,0,0.455768223388005,0.46112780877612,1.52587995496613,0.869178975376065,0,0.183195186803725,0,5.10966490978682,0.627921025580099,0.831058409500782,0,0.392125068635479,1.34257269580674,3.03605972358696,1.27149263184303,2.3209787098083,0.326465616318295,0.424059214301822,0.649165919226273,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,8.5753750931363,0.391329237864179,0,0,0,0.30607276163049,0.063186579628488,0.60129367765797,0.311064574191741,0,0.661983911750998,0,0,0.284609546029793,1.52542140314453,0.694238953340524,0.195984794828755,1.04471047896483,0,3.0957485844891,1.9351266257817,1.31560770755134,0.985385484638511,0,0,0,0.685209623233754,1.58971689362392,0.0633107959558787,3.71547627196126,0,0,1.79828648623917,0.576361668616424,0.343609788497747,3.08870996151536,0,0,0.235694034616795,1.35904206073614,1.255234155748,1.52997326454483,0.577901179803038,0,0,0,0,1.05154941711726,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.787831823072237,1.31865373409866,0.943649613958588,0.0984274815147488,1.18542664892098,0,0,2.41129722697529,2.61324929534744,2.9080823662043,0,0,0,1.34173875039706,0,0,0,0.179287339332845,0.959575986597226,0.714695326373367,0,0,0.542999601753713,0,0.653174720218818,0,0.82092520749339,0,0.453248366080503,0,0,0,0,0.171086837884329,0,0,0,0,0.496166021811951,0,0.852548188666271,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0,9.26935854072747,1.24980407962107,0.151649117541648,0.570930667089935,0,1.40500471742064,1.01444720027578,0.149254802886874,0.934853239388898,0,0.189403005275089,0,0,0,0,0,0.591420599958536,0.477890301491107,0,0.465788870628778,1.24411862352257,0,0,0.150257608997218,0,1.22061219961398,0.181848659202559,0.107410557042488,0,0,7.20049976393677,0,0,0,0,0.214441591374926,1.30497145982606,3.40058888268409,2.08370226891451,5.38420749914229,2.8654214573038,0.308801447160972,1.09642024789354,1.76689145945881,1.54331230616732,1.35153952522458,3.07489822305536,1.38172136692479,0.303859956177382,0,0,0,0,2.6208787907713,0.491545817507439,0,0.59996218756479,1.28030075632969,0.172214979660816,1.13503190713367,0.736423801007363,0,0,0.511577485214607,1.07824811396682,0.786329709279482,4.25917588948854,1.18812770967818,2.33832412111851,0.867550349813015,0,0,2.91788456504637,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.785181748008205,0.471878893390961,0,1.84841065840541,0.762764190934334,0,0.397832444232549,0.0752103283492573,1.0085253435176,0,0.785720083444267,1.80149109261106,0.147856086217045,0,0,0,0,1.64092442705466,0,0.496211178389294,1.40696995487696,0.766574565837572,0,0,0,0,0,1.03710588800201,0.342976018874837,0,0,1.65471377237555,1.66847102838104,0,0.157115589916002,0.280272163313789,0.913158720509496,0.647782773655864,0.47775168788705,0,3.63431306985271,1.16241425368125,0.173858272302579,0,0.207216164163037,0.51215543128185,0,0,1.18332000730565,0.852134047591577,0,0.22910686854405,0,1.91107787795487,1.00669888618013,0.392600934460972,0.121917924982269,0,0,0,0,0.467878926924211,2.58636007709779,0.594600453887843,1.35535298446752,3.29821550236287,1.81155412280008,0,0.437119121007915,0,0,0.235676547101626,0,0,0.4226557275834,0.169927114687817,0,0,1.29923502702408,0.535661815816973,0,0,0,0,0.143339583151451,2.99765968167051,0,0,1.0580536810308,0.743990036333503,0,0.865253124247578,0.756998549010474,0.655593431782173,1.52038201213724,0.917899467677836,2.93939145792117,0.643264296743914,5.51556586443225,0,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0.258355639344024,0.248298857183432,1.6819779387092,0,0.404234377916439,0.217716747896961,0.684466602170562,0,0.0717222053926763,0.332660356546013,0.488419611665847,1.49418284228802,0,0,0,0,1.62758471326295,0,0,0 | |||
|short_description=p@chr1:214814697..214814711,+ | |||
}} |
Latest revision as of 03:46, 28 July 2015
Short description: | p@chr1:214814697..214814711, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:214814697..214814711, + |
Coexpression cluster: | C523_diffuse_acute_testicular_medulloblastoma_acantholytic_mesenchymal_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.72e-09 | 25 |
neuron associated cell | 1.21e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.21e-07 | 17 |
mesothelial cell | 6.22e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.76e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.84e-35 | 235 |
disease of cellular proliferation | 7.59e-35 | 239 |
hematologic cancer | 2.35e-15 | 51 |
immune system cancer | 2.35e-15 | 51 |
organ system cancer | 2.50e-15 | 137 |
cell type cancer | 3.33e-15 | 143 |
leukemia | 3.80e-13 | 39 |
carcinoma | 1.18e-09 | 106 |
myeloid leukemia | 5.82e-08 | 31 |
bronchus cancer | 6.75e-07 | 7 |
bronchogenic carcinoma | 6.75e-07 | 7 |