FFCP PHASE1:Hg19::chr1:223957549..223957580,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1479 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000472601_5end | |||
|cluster_id=chr1:223957549..223957580,+ | |||
|description=CAGE_peak_9_at_CAPN2_5end | |||
|id=chr1:223957549..223957580,+ | |||
|ontology_enrichment_celltype=CL:0000003!6.27e-11!722;CL:0000548!1.37e-09!679;CL:0000004!1.37e-09!679;CL:0000255!1.37e-09!679;CL:0002371!1.56e-09!591;CL:0000012!5.66e-09!682;CL:0000055!9.40e-09!180;CL:0000144!1.22e-08!625;CL:0000057!6.22e-08!75;CL:0000063!1.45e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000569;7.45e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,5.72e-07,4;CL:0000011,5.72e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;7.45e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.66e-09;14!DOID:0060084;4.01e-07;3!DOID:127;4.01e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.99e-09,14;DOID:0060084,4.03e-07,3;DOID:127,4.03e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!6.82e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.99e-07,315;UBERON:0004120,1.99e-07,315;UBERON:0006603,1.99e-07,315 | |||
|phase1_expression=0.54503513781167,3.8538094300377,0.140954404095971,6.00439790118782,0,0,2.53299878168311,1.89515962028049,0.522371256399677,0,0,0.436882744260345,0.527533956456907,0.247532705920093,0.331397375727916,5.3786011716142,3.01347264011988,2.92124036154949,1.95173119516203,0.123121058076788,0.408001382488506,0,0.286235987131057,0.821246550437305,0.87879847716362,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,1.45398238779565,0.377875943688809,0.727752183563449,0.464858073811369,1.23350366406548,0.309706370895104,1.1507695692886,0.512321413058201,0.47296445977717,0.344745680736619,0,0,1.50593871634084,0.818718450173537,0.674170453335254,2.14258724659632,1.28371610830437,1.27867425159808,0.659702600373432,0.797854630486527,1.27867425159808,1.7412554317715,1.13477044938228,0.622822248995575,1.50749199154046,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,0.949387162322653,0.633765858935825,0.212604299965044,0.209658645508376,0.336985893439485,0.600707571366025,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,1.94826728407911,0.445641827540694,0,0,0,0.640456598628376,0.650296737799391,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.802320587350522,0.724122019413995,0,0.670700859703636,0,1.0843174571537,0.50133791063589,0.869079113764942,0.795285947051099,0,0.0945348171640679,1.55210578223795,0.527008714158756,0.196468613246569,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0.694281003215189,0,1.25849830862972,4.40188867104108,0.835979866147242,0.775250277507987,0.71153252537342,0.33472061276467,0,0,1.22031028774085,0.367663080345869,1.62028389576352,0.535798369704479,0,0,0,0,0.549605231791222,0,0,0.436094052142534,0,1.01304409331664,0.794455084879313,0.860509862246441,1.41867352879343,1.68203280042692,0,0.98667019366864,0,0.942974704487816,1.14423332179421,0.151357427644931,0.576175924479999,0,2.18512053781224,0,1.94283284717341,0.469737994575059,0.647491777472526,0.98315564691574,1.02077085627447,3.68502951935304,0.206651562351531,0,0.741800787835671,0.910161361938026,0,0.673344455816265,1.00094815897571,0.831192346452549,0.438977620880838,1.22595118319608,0.45071417671979,0.680593098960126,0.717558542755448,0.213557388818567,0,0.300091096084402,0.618315175430633,1.28820270022815,0,0.168776332241266,0.876933046450788,1.00973509697646,0.276149695926898,0.646584227275248,1.77504796258307,0.604512589365842,0.67824236924195,0.57978255948989,1.36373060295417,0.573609190778008,0.121973706129595,0,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,1.39310378409594,1.44375896333917,0.591534000199219,1.01150814046861,0,1.65440959098591,0.217879444092406,0.474541238222193,0.943819157121151,0.196221465125346,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0,0.614942192715568,1.02940686179115,0.768251997860379,0,0.703702806881416,0.740707561268237,0.325808305310325,0,7.21656710126366,0.695582429850461,0.117408694235822,0.144366447761074,2.31492756288305,0.761016608938393,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,0.671928512795438,0.567100388969546,0.53735113621709,0.581267877027924,1.53353071666084,0.492663237895943,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,1.02827492703324,0.300343057843917,0,0.112131084345361,0,0.80672114403045,0.646358578788889,0,1.690605505112,0.531876233169741,1.04007436911366,0,2.83698264046557,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0.355391948742546,0.791951872933429,2.1100756394171,1.74306691720059,2.29937879718731,0,1.00451418286425,0,0.239624855491583,2.29723871668228,0,0.579125226670317,2.05476322550383,0.537182889719687,0.224170287987055,0.197030760201927,1.2937654491571,0.641715181398742,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0.12269149171914,0.500170521059677,2.44138521329762,2.70362119990049,5.53129865271201,1.10391690523754,0.819989904948992,0.601892199455438,2.27407504055985,1.03473071292505,0.664225598535437,0.921845842708516,1.12948698808508,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0.606255142892519,0,1.81434175997808,0.248107807818777,0.61384789315225,1.96462066103151,0.256278298511402,1.02341449813341,0.321707842287215,1.48418066444991,4.1636617326717,2.30830242907065,0.328508624055237,1.03850885836724,6.74020195067764,0.120859449591622,3.20810352485256,0.276242966807689,0.574072240823034,2.73136752010076,2.88473712910733,0,0.539107359730903,0,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0,0.25645012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| |||
|short_description=p9@CAPN2 | |||
}} |
Latest revision as of 22:32, 15 September 2015
Short description: | p9@CAPN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CAPN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000472601_5end |
EntrezGene: | CAPN2 |
HGNC: | 1479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 5.72e-07 | 4 |
migratory trunk neural crest cell | 5.72e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.99e-07 | 315 |
mesoderm-derived structure | 1.99e-07 | 315 |
presumptive mesoderm | 1.99e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.99e-09 | 14 |
cell type benign neoplasm | 4.03e-07 | 3 |
leiomyoma | 4.03e-07 | 3 |