FFCP PHASE1:Hg19::chr1:236247199..236247215,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:236247199..236247215,- | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_at_chr1:236247199..236247215,- | |||
|id=chr1:236247199..236247215,- | |||
|ontology_enrichment_celltype=CL:0002251!6.51e-13!21;CL:0002076!2.17e-11!43;CL:0000223!2.04e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0002336;5.13e-23;1!CL:0002261;5.13e-23;1!CL:0002170;5.13e-23;1!CL:0002251;6.92e-18;20!CL:0002178;1.40e-08;3!CL:0002076;4.27e-07;42!CL:0000244;7.48e-07;4!CL:0000731;7.48e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,6.40e-23,1;CL:0002261,6.40e-23,1;CL:0002170,6.40e-23,1;CL:0002251,7.23e-18,20;CL:0002076,1.00e-08,42;CL:0002178,1.40e-08,3;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.07e-23;1!DOID:3149;1.07e-23;1!DOID:3451;1.48e-12;2!DOID:4159;1.48e-12;2!DOID:0060122;1.48e-12;2!DOID:1749;3.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.07e-23,1;DOID:3149,1.07e-23,1;DOID:3451,1.48e-12,2;DOID:4159,1.48e-12,2;DOID:0060122,1.48e-12,2;DOID:1749,3.04e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.31e-10!35;UBERON:0000162!2.53e-09!14;UBERON:0001353!2.53e-09!14;UBERON:0000163!2.53e-09!14;UBERON:0006866!2.53e-09!14;UBERON:0000164!2.53e-09!14;UBERON:0000931!2.53e-09!14;UBERON:0004122!1.31e-08!15;UBERON:0006554!2.84e-08!44;UBERON:0001046!3.37e-08!19;UBERON:0001008!5.15e-08!45;UBERON:0004119!1.83e-07!169;UBERON:0000925!1.83e-07!169;UBERON:0006595!1.83e-07!169;UBERON:0002367!3.81e-07!11;UBERON:0010147!3.81e-07!11;UBERON:0009846!3.81e-07!11;UBERON:0003353!3.81e-07!11;UBERON:0004902!3.81e-07!11;UBERON:0003820!3.81e-07!11;UBERON:0009847!3.81e-07!11;UBERON:0000344!4.18e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;6.42e-23;4!UBERON:0004785;6.42e-23;4!UBERON:0003729;7.75e-16;13!UBERON:0000974;1.22e-15;6!UBERON:0000344;1.55e-10;20!UBERON:0000165;1.06e-07;28!UBERON:0000014;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,6.42e-23,4;UBERON:0004785,6.42e-23,4;UBERON:0003729,8.15e-16,13;UBERON:0000344,1.60e-10,20;UBERON:0000974,8.84e-10,10;UBERON:0000165,1.91e-07,29;UBERON:0000930,1.91e-07,29;UBERON:0000014,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0.439001141634502,0,0,1.01847289674383,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.601519410909855,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54744122829341,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,1.43176155503017,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,5.43752602686553,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,1.19885765749278,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,15.4299956295662,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71635536432595,0.308801447160972,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35554524402461,0,2.93485757634686,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0.790068058663633,0,0,0,0.828864656652147,0.51215543128185,0,0,0.591660003652827,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0.299823467774787,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:236247199..236247215,- | |||
}} |
Latest revision as of 05:26, 28 July 2015
Short description: | p@chr1:236247199..236247215, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236247199..236247215, - |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 6.40e-23 | 1 |
endothelial cell of viscerocranial mucosa | 6.40e-23 | 1 |
keratinized cell of the oral mucosa | 6.40e-23 | 1 |
epithelial cell of alimentary canal | 7.23e-18 | 20 |
endo-epithelial cell | 1.00e-08 | 42 |
epithelial cell of stomach | 1.40e-08 | 3 |
transitional epithelial cell | 7.70e-07 | 4 |
urothelial cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 6.42e-23 | 4 |
respiratory system mucosa | 6.42e-23 | 4 |
mouth mucosa | 8.15e-16 | 13 |
mucosa | 1.60e-10 | 20 |
neck | 8.84e-10 | 10 |
mouth | 1.91e-07 | 29 |
stomodeum | 1.91e-07 | 29 |
zone of skin | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.07e-23 | 1 |
keratoacanthoma | 1.07e-23 | 1 |
skin carcinoma | 1.48e-12 | 2 |
skin cancer | 1.48e-12 | 2 |
integumentary system cancer | 1.48e-12 | 2 |
squamous cell carcinoma | 3.04e-07 | 14 |