FFCP PHASE1:Hg19::chr1:27114656..27114712,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26031 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NUD9,B4DWP9 | |||
|association_with_transcript=0bp_to_ENST00000374145,ENST00000449950,NM_001202554,uc001bna.2,uc010ofg.1_5end | |||
|cluster_id=chr1:27114656..27114712,+ | |||
|description=CAGE_peak_1_at_PIGV_5end | |||
|id=chr1:27114656..27114712,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.93e-12!365;UBERON:0000481!1.03e-10!347;UBERON:0004119!3.01e-09!169;UBERON:0000925!3.01e-09!169;UBERON:0006595!3.01e-09!169;UBERON:0001007!5.26e-07!155;UBERON:0001555!5.26e-07!155;UBERON:0007026!5.26e-07!155;UBERON:0003104!6.17e-07!238;UBERON:0009142!6.17e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.41e-08,160;UBERON:0000925,2.41e-08,160;UBERON:0006595,2.41e-08,160 | |||
|phase1_expression=2.54349730978779,5.56661362116556,5.21531295155093,6.00439790118782,4.46961094427288,6.97870819280295,10.1319951267324,3.79031924056099,9.40268261519419,2.21160542851358,2.09340350391728,3.71350332621293,6.33040747748289,8.66364470720326,12.5931002776608,3.36162573225888,5.42425075221579,5.84248072309899,1.46379839637152,4.062994916534,5.30401797235058,5.01527554364941,1.43117993565528,1.91624195102038,2.13422487311165,2.36881557818649,2.05251473624864,1.8890587515283,1.57345710739562,0.383829398097213,1.23852898652861,8.27479102031034,7.8313538882345,5.17655614233503,2.47895041856965,2.98555388223585,1.46800219667424,1.10799081706375,1.40381113229099,0.651032612147555,3.35873211359887,4.53451132426571,3.60605794687861,1.74477886535478,2.26725566213286,2.18325655069035,0.464858073811369,2.05583944010913,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,4.06279459783025,1.12945403725563,1.36453075028923,1.12361742222542,1.53041946185451,0,1.27867425159808,0.659702600373432,0.797854630486527,0.426224750532694,0,0,0,1.00499466102697,0.521482918420201,0.434377689410233,1.21079900526674,0,0,2.32380814943136,1.91343869968539,1.67726916406701,2.80821577866238,2.55300717830561,2.08943262706204,3.42015292489498,3.38158351238453,3.28795476776341,0,3.27683166757279,2.66852776159066,2.13365111283254,2.80277190925209,4.02326707968138,1.98313461835459,1.90810750907073,0.569212969109448,1.76171156811282,0.382273228125229,0,1.68152568894461,1.84368859342554,1.57367816091066,0.393010762749165,0.411202997999018,4.01247588937627,2.93330039970231,2.36723902867367,0,4.67923918917729,2.65145316727353,2.21533894583621,1.89562704635511,3.45846563259323,2.86130564631732,3.12432018746985,2.48715016007264,1.73881851441031,1.33457906845854,2.94294910898684,0,3.05935225283429,2.29932296161153,1.37450978193052,1.26509846009751,3.50421955756506,2.60433381542567,3.8018081777935,3.312652619711,3.58362511232371,2.49861453104692,2.8413270245282,4.10563998460523,0.604820229674197,0.534880391567015,0.434473211648397,4.87613732627923,2.01210257911091,1.91793842765295,2.89151321907653,6.01605492763067,6.95263291011954,1.5905718941022,3.40644409211845,2.83604451492204,1.99556457716308,2.10803485663503,5.82856885964821,9.4716774956061,7.41568885568859,3.57002133020152,2.61194605948901,1.99436940778298,0.715471872916026,1.14398982156026,1.48583000531826,1.39133685156694,2.58070378531837,0.694281003215189,2.82653970962005,2.09749718104953,0.275118041940067,1.04497483268405,1.55050055501597,2.13459757612026,1.33888245105868,2.01414658554573,3.80136052859256,2.4406205754817,0.735326160691737,0.81014194788176,1.16089646769304,2.02076435363553,1.68917220724983,0,2.84779697870439,1.09921046358244,1.31780417436063,0,10.0301631992783,4.96971951695318,2.15271869829786,4.10468460520978,4.58938593198102,2.12801029319014,1.12135520028461,1.06748995729705,6.166688710429,2.48968828319813,2.69421344139376,2.7788523529288,4.23800797405808,1.72852777344,4.45210720484214,5.61888138294577,3.4228309292667,3.58676833324323,3.52303495931295,2.26622122115384,2.52811452064047,7.34955016517616,1.47401180774122,10.3325781175765,3.56400857184616,7.17074094907815,3.64064544775211,7.90479955997862,1.68336113954066,2.00189631795143,3.3247693858102,3.5118209670467,3.67785354958824,4.8076178850111,0.907457465280168,0.89694817844431,5.97960688691989,3.39091041855299,5.40163972951924,2.67936576019941,1.8034837803194,3.35010341396862,3.71307930930786,2.24105111870757,2.77677151668526,6.25939310767636,7.27407255684654,5.68015348026583,3.12331504505685,1.52604533079439,3.47869535693934,3.27295344709002,2.29443676311203,1.58565817968474,1.32529768321485,2.20768491452085,2.90250954043037,2.27088765788066,5.47466038613745,4.69348596989448,1.92972281457866,5.52539685409922,10.6804623447355,22.3782639317572,3.66751080123516,2.69735504124963,3.85617647813571,2.75734931830985,3.7039505495709,3.32178866755535,3.37078270400411,4.31687223275761,2.69323009862473,0.738155454624648,1.40241773803446,2.8810180793198,8.82052268313252,15.2106041786197,3.9313088667105,11.2250082269467,2.20731549707325,3.81264159483652,2.40194934417936,4.93876284338815,4.49607013030478,2.51322431029077,3.61094936118265,3.25808305310325,5.19967392639789,1.44331342025273,3.4779121492523,3.99189560401794,1.87676382089396,1.38895653772983,2.28304982681518,8.69224837755203,6.00940313466411,3.44703808522356,4.21207677250628,4.60756603095058,0.93733833986777,3.35964256397719,2.1266264586358,10.030554542719,6.68458058582112,6.13412286664338,0.492663237895943,2.99364675644969,2.48793738648926,3.02651902175619,2.39860623510122,2.34942208881025,5.34783795781589,8.20522130470329,1.71072446022705,2.15937734676979,1.20137223137567,3.14409075893636,1.34557301214433,3.92364061949952,0.5867062865676,6.33431407213111,17.8828222925941,0.845302752556,2.6593811658487,3.12022310734098,3.60090323966999,5.67396528093113,2.93064396917709,4.00338382242813,17.9065129779176,6.58592269424615,0.65147236858747,2.48774364119782,1.58390374586686,3.91871190177462,5.22920075160176,3.19913571782583,7.29742683847143,1.50677127429638,4.21667878966063,1.67737398844108,4.59447743336456,5.70547620162874,3.61953266668948,7.80810025691457,4.1184021545176,4.9317463357152,0.788123040807709,0.862510299438069,0.898401253958239,1.77866236955724,0,0,0.670065061337395,0.637938751653163,0.749007023947182,2.99161459204025,0.828831026872071,9.20186187893549,12.5042630264919,4.06897535549603,3.74347550755453,2.67643483195743,6.15039418632345,4.56851518471581,7.52365249319297,15.9185252839189,19.6598835455759,2.65690239414175,2.21243002250044,3.47534457872331,11.356467132839,8.23544217146054,1.03384013061444,1.07857100409308,1.06727557803444,5.15316871458641,3.32870879020994,10.2812699732091,4.71404834855676,1.53461973288062,4.2099014164961,5.50998341799514,2.55853624533352,3.21707842287215,10.3892646511494,1.23367755042124,2.13074070375753,1.39616165223476,1.55776328755086,1.85936605535935,1.0877350463246,7.61924587152482,7.64272208167939,2.98517565227978,0.364182336013434,6.55622074797121,5.86559496779635,2.38747545023686,3.13739907670742,5.84556898613043,2.84989398010764,3.4120015221269,2.55140557914773,1.0795795805107,4.62681758070868,6.77366093859632,6.02027728625824,2.80363900349542,4.15538004464362,4.25362033972139,1.31555925987561,1.0457418040996,2.56450125116389,4.59220503979588,1.30151357865721,10.2010601531245,1.00726411300178,1.56768049849117,4.59412430396938,0.650060246036521,3.21367859688319,2.99679226705578,1.3864375540318,0.921022048356777,2.20538515975249,5.15617175367713,4.20548412351263,1.70453254832202,1.78064071293475,4.62797763010739,3.2672311452068,4.8492830747942,4.75441570021085,2.32422774648643,5.66662224295152,5.5762981612848,2.15623506123262,3.19383618190213,6.95946393660058,6.4863476686372,4.43687148900173,2.232950216158,1.89827654831236,3.24071329670502,4.09436466098134,4.2793898803392,6.36406495851874,6.27958912159384,3.77732160924961,2.74537029736055,1.53156123049392,2.42618977887979,4.75530963519025,1.68503382495592,5.36397112998549,3.1682753652067,5.28250733783777,3.8219975194236,5.5148118461948,5.65040583101214,1.65409603063837,4.64407282668854,6.13831239355268,10.9967351510671,3.9353685122798,2.84074527747786,4.02770547529675,3.94373843545138,2.58140433967293,2.94747123039363,4.280052617775,1.41904425628239,5.2776908824416,3.62224382255892,5.31262443272001,7.69856384538962,4.32999507264804,5.3624182042863,3.26672954583968,8.94366107379402,6.02707521739722,5.05414427002877,6.65145230305014,4.13502120372527,1.52234282769651,3.0585488285695,2.84823593587081,3.81170840732462,2.05681136543097,1.94541993357815,3.7802200606668,0,1.06824071127473,1.92495971052672,1.47024129588619,1.48642540100575,0,1.70740424036194,1.11598390910176,1.39705560002972,2.10655907145603,0.635020748171649,2.27235358192189,2.24637742490767,0.912938716132769,2.19351854082233,0,1.01575066680962,0.642352300414798,1.61439765752838,2.12923118845163,0,1.84344458585075,1.78940886313933,1.83534055883099,1.9538809540204,2.50565556505718,0,0.811367035427949,1.33228787199128,0,8.23418377796167,3.66270448179735,4.73306034823102,3.23185814404687,0.284136146806413,4.7748896947538,9.79983446747707,13.8222315944654,0.994147647766298,4.64209074154692,4.34103949589333,0.988823245360557,3.3780065300479,1.79323189425963,3.59169090190492,4.28285671352269,2.24991101504741,2.95403533106567,0.622079175323615,1.79736702294654,4.83357171624145,3.06943422136123,3.25523238601881,2.3948309234694,3.33410970433911,3.87733098438087,3.6179558283122,5.98841394003583,5.20855522170466,3.06109999986685,4.34999745260876,6.25863965570248,4.57656570526979,2.6002644994473,3.44743373241465,1.16641845353302,2.08349993919951,1.77148277162768,3.25610384288601,3.05163472634166,3.20679853800551,2.65992857058193,3.51016635446356,6.86312320169638,1.25481369850743,2.77020930613669,1.48124672601102,4.6112780877612,1.79515288819544,4.23724750495832,5.42301971544263,3.48070854927077,6.39641731222362,0,1.09886179476517,1.16348177330109,1.80476528493745,2.54881294613061,2.01385904371011,2.27704479269022,1.90723894776454,5.90794580678476,6.8557779426842,1.83758992864123,1.94749775767882,5.97157158647103,3.98059040265026,9.16545217400438,1.77912677208373,2.22415090103705,1.56632924258183,4.78548044162807,0,4.45102446878144,0.91227394607833,3.52196314077761,4.61282721114776,6.70793484843964,9.67925728389311,0.91821828489147,1.01098527405581,1.9542044523884,0.72581733978073,4.6525771089503,7.94380694101197,4.39506085770115,2.38944859545918,1.70765727617876,1.94144542218394,3.29763502836749,2.44980993535944,1.74118413160805,6.29016005671309,1.37588825977293,2.80593360738347,3.80064448848165,2.95615645391553,3.10364852762942,0.882561266915003,3.84167259326905,2.60379656828827,5.56400912768371,3.22885059374981,1.17330829640882,2.24444696704294,5.12287187374446,2.99714414373195,2.3054466744657,5.8413664044617,2.4023299700675,3.31326035372744,4.10033367365927,11.549007696223,1.49494626680975,1.04602846312333,4.99791266417977,5.77901179803038,6.00420288709789,5.06549901900374,1.27746588066972,0.859530882839914,2.36598618851383,1.95497680890578,3.66656678418694,1.43574604915363,0.599037001496973,1.28767814440971,1.56220020209311,1.00775208730089,4.32359860250884,2.32991899054908,2.04836273998782,1.64831716762333,1.81989568406299,0.295282444544246,5.41909325221021,5.56660782866512,4.08610218334727,1.76828463311521,3.30094647833361,3.73896304226267,0.674921674654501,2.32140586367385,3.28047605953333,22.1386893815516,4.96475955984948,4.14391246266485,2.95680942254338,4.48218348332112,4.60596473566669,3.57347663186684,0,1.27134268827375,8.14499402630569,6.91377192961014,6.53174720218818,1.19730191562487,1.06720276974141,3.06698439213759,2.26624183040251,12.7500443299932,7.95041333473328,3.23207390903876,5.95046707842105,6.50129983960452,6.34333520085005,4.48507132784318,3.14408610199332,4.55662960881915,0.496166021811951,1.18566979138767,1.33971858218986,0.638341257770182,7.07223144380316,6.7686271386129,7.04594826555962,5.90170735277648,5.0257310800075,2.65820453990096,2.56255156294123,2.8793914062495,2.29363678276028,4.21530395840039,4.65723022060376,1.24513771442608,3.49945142293898,1.66814029295813,3.42558400253961,6.11691131215246,0.936669811613763,1.59413131471908,1.94031243752936,3.73941295755559,2.21922344601045,4.35626912132705,3.77351852628863,5.33886732957922,5.03448150473232,2.57092570397506,3.10874401165561,1.62640664988597,1.27437413730962,11.2450778040901,2.17368139626763,2.90294345488599,3.98762571836992,3.65221543268214,5.55953153289708,1.14241563650639,2.44122439922797,2.36403256963327,4.94088562395447,1.85613503951397,1.99047944349308,1.20008329398946,3.43395705182793,2.35724642136143,7.57109389371906,2.50405779529494,1.28664954824955,1.04397716786085,0.680117776536817,2.77826969188601,1.46842022703881,4.65630986811867,2.47041157728778,3.72782884283802,1.94358060540469,1.92914038270915,6.25087030416369,2.81865670446741,1.72715170865599,3.03859956177382,4.28601152070365,1.55888247071511,1.86010776438708,4.74339643341948,2.29326894192489,2.70350199629091,1.26787274015176,2.19986135440423,3.30744362051837,8.7829639627016,1.13503190713367,6.62781420906627,7.83325243228889,9.33115890049459,1.91841556955478,0.215649622793364,1.10086159299127,0.436838552768056,3.05518553917245,1.06287460050841,3.84200869202907,3.91051442581271,1.90802610392051,0.552032215008773,3.20228299314188,4.93746321166957,2.4499638188256,3.59683660540173,2.8339315265117,2.71377560397157,2.46139637088906,1.51243017733031,4.21859240031729,3.39098855826887,1.42769420259154,7.16478345057487,6.1344256140825,2.20114318226015,1.96393632455575,2.66967466827017,0,0.198916222116275,2.1058891937792,2.42046082444224,4.68908406739856,1.30953347240711,2.62035068016155,3.69640215542613,2.70150338473579,1.56215619722769,4.13373593002368,3.80494861163441,0.546974809018219,3.83780436800028,1.48863353516788,1.58284119923659,3.96063525682745,2.14280734351315,3.69912094440706,3.03482802118316,5.91921697513374,3.54809480650555,2.07421177600403,3.25827217931095,2.85472878502693,4.27523028158519,4.25497827182286,2.00216523405724,6.20095433519061,3.14231179832004,3.08299379645168,3.65263488203798,7.98932087508899,9.555033757741,3.57382720883282,0.632054446930906,1.16241425368125,0,3.20684545892101,5.80205259656503,9.38951624016725,8.98637560358319,5.16272830584333,9.34822805771466,11.4185962377271,4.23387050190929,8.47695413612985,3.1020638566432,0.955538938977433,2.68453036314702,4.71121121353166,6.58356794904255,2.58971534875158,1.43727929598746,0,5.34282092365053,4.44484980578001,2.18845852677505,3.80544290488219,2.14597555874024,0.659643100472575,2.11347980993343,5.94241017431174,5.90110813360685,3.76253837089218,4.90296643507811,4.24217784782927,2.1593931382644,4.75274240523338,1.6906229103336,2.0391253762538,1.78569444161722,1.80482086326016,1.89888196257365,3.21397089490184,3.17605384544123,5.13544746810677,1.46067277649303,4.58729283404541,5.8769229092095,0.946629373159108,4.21547239183671,1.74540276136151,4.2322147241232,2.60396512716726,6.47045880083986,2.59575937274273,1.51399709802095,4.69841959443891,2.66066852124018,1.1218771271618,0.534434810531121,1.56221329209236,0.50141507858475,8.48721420044281,9.37874455546625,0.829169439458779,5.68881477240424,3.41174371041569,2.61870874610114,2.58355639344024,4.40730471500591,1.90624166387043,9.8016623748374,6.87198442457946,3.04803447055746,1.71116650542641,2.6940821205835,4.08816570738255,2.99394320891412,1.95367844666339,4.8027305644972,5.7921684686082,4.7607357116491,4.69281884806909,3.42276043712026,1.62758471326295,1.33151354837103,2.61655931668334,2.24397944612263 | |||
|short_description=p1@PIGV | |||
}} |
Latest revision as of 06:29, 17 September 2015
Short description: | p1@PIGV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIGV_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374145, ENST00000449950, NM_001202554, uc001bna.2, uc010ofg.1_5end |
EntrezGene: | PIGV |
HGNC: | 26031 |
UniProt: | Q9NUD9B4DWP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.41e-08 | 160 |
endoderm | 2.41e-08 | 160 |
presumptive endoderm | 2.41e-08 | 160 |