FFCP PHASE1:Hg19::chr1:40839753..40839766,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25082 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_uc001cfj.2,uc010ojh.1_5end | |||
|cluster_id=chr1:40839753..40839766,+ | |||
|description=CAGE_peak_8_at_SMAP2_5end | |||
|id=chr1:40839753..40839766,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.48e-30!140;CL:0002087!6.57e-28!119;CL:0002032!1.50e-27!165;CL:0000837!1.50e-27!165;CL:0000037!2.21e-27!172;CL:0000566!2.21e-27!172;CL:0002031!6.40e-26!124;CL:0000988!1.02e-24!182;CL:0000542!5.89e-15!53;CL:0000051!5.89e-15!53;CL:0000766!1.58e-14!76;CL:0000838!1.72e-14!52;CL:0000763!3.94e-13!112;CL:0000049!3.94e-13!112;CL:0002009!1.52e-12!65;CL:0002194!1.70e-12!63;CL:0000576!1.70e-12!63;CL:0000040!1.70e-12!63;CL:0000559!1.70e-12!63;CL:0002057!7.27e-12!42;CL:0000839!7.67e-12!70;CL:0000557!1.49e-11!71;CL:0000860!9.05e-11!45;CL:0000791!2.44e-10!18;CL:0000789!2.44e-10!18;CL:0002420!2.44e-10!18;CL:0002419!2.44e-10!18;CL:0000790!2.44e-10!18;CL:0000625!1.09e-07!11;CL:0000084!1.63e-07!25;CL:0000827!1.63e-07!25;CL:0000945!7.18e-07!24;CL:0000826!7.18e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.46e-19;13!CL:0000775;8.40e-12;3!CL:0000094;2.07e-11;8!CL:0000542;7.96e-11;53!CL:0000945;8.33e-10;24!CL:0000738;1.24e-08;136!CL:0000771;2.05e-08;2!CL:0000081;3.51e-08;11!CL:0002087;2.24e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.91e-23,136;CL:0002087,1.95e-18,115;CL:0000236,2.59e-18,14;CL:0000037,3.80e-17,168;CL:0002032,6.21e-17,161;CL:0000837,6.21e-17,161;CL:0002031,6.74e-16,120;CL:0000988,7.90e-16,177;CL:0000838,6.08e-15,52;CL:0000542,1.40e-14,53;CL:0000051,1.40e-14,53;CL:0000775,1.05e-11,3;CL:0000094,2.15e-11,8;CL:0000945,5.88e-10,24;CL:0000826,5.88e-10,24;CL:0000766,3.61e-09,72;CL:0000771,1.75e-08,2;CL:0000081,3.61e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;7.96e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.81e-16!102;UBERON:0003061!4.81e-16!102;UBERON:0002193!6.95e-14!112;UBERON:0002371!3.84e-10!80;UBERON:0001474!4.27e-09!86;UBERON:0004765!7.82e-09!101;UBERON:0001434!7.82e-09!101;UBERON:0002405!1.15e-07!115;UBERON:0007023!2.18e-07!115;UBERON:0001950!3.44e-07!20;UBERON:0002619!4.31e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-07;15!UBERON:0000179;1.09e-07;15!UBERON:0000463;1.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.03e-08,98;UBERON:0003061,2.03e-08,98;UBERON:0002193,3.12e-08,108;UBERON:0000178,9.14e-08,15;UBERON:0000179,9.14e-08,15;UBERON:0000463,9.14e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.382067028739756,0.328402357799783,0.0787107813136792,0,0.767658796194425,0,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,1.60435557976113,0.868043482863407,1.56740831967947,0.32389366601898,0.257575567634187,0.436194716338694,0,0.485168122375632,1.16214518452842,0.411167888021826,0.309706370895104,1.1507695692886,1.2808035326455,0.945928919554341,1.03423704220986,0.645484683583826,0,1.31769637679823,0,0,0,0.641858054152187,1.27867425159808,0.659702600373432,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,0,0.502497330513487,2.60741459210101,0.217188844705117,0,0.368277635987565,0,0.422510572623884,1.4882300997553,0.628975936525128,0.44931452458598,0.901061357049038,0.64290234678832,0.570025487482497,2.38700012638908,0.182664153764634,5.27988733383968,1.63841583378639,1.77901850772711,0,2.00197993518006,2.29900975981793,1.32208974556972,0,1.70763890732835,1.76171156811282,2.6759125968766,0,0,0,0,1.96505381374582,1.43921049299656,0.668745981562712,0.977766799900771,0.946895611469467,1.94826728407911,0.334231370655521,0.883817722424512,1.32920336750173,0.270803863765016,1.0247305578054,0.650296737799391,0.164437904603676,0.552700035571697,1.15921234294021,2.22429844743091,1.07016331235885,2.09071047609954,0.113309342697566,2.29932296161153,0.68725489096526,1.51811815211702,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,0.511946444617674,3.74792179657038,0.236777252044017,0.821127996921047,0.403213486449465,2.13952156626806,2.02754165435919,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,11.6334079244498,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0.448346041655403,0,0.485618833104395,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0.720599767084807,0.25248486685276,0,0.381988425558278,0,0,0.411309970813294,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0,0,0.224170287987055,0.197030760201927,2.80315847317372,1.66845947163673,0,0,0,0.335032530668698,0,4.49404214368309,5.9832291840805,2.07207756718018,0,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,2.80428461064202,0.853820462427555,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.0821271560138091,0.519254429183621,0.581051892299796,0,0.601519410909855,0,0.34444334449382,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.462145851343933,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,1.52234282769651,0.764637207142375,1.70894156152249,0.714695326373367,1.23408681925858,0,0.540031437238115,5.55187623405989,0,0,0,0.557409525377156,0,0,0,0,0.383010740264733,0.211673582723883,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0.614481528616916,0.223676107892416,0.834245708559542,0,0,0,0.811367035427949,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,1.9882952955326,0.422008249231538,0,0.16480387422676,0,0.398495976502139,1.65770349318689,0,0.20453736500431,0,0,0,0,0.511572370226872,0.0986434056369336,4.7896618469388,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0.156980256395025,0,0.676786981851542,0.392125068635479,0,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0.208843899010911,0.202203398942031,0,0.234264445725339,0.729819156862664,0,0,0,0,0.61214552326098,0.442306057399416,0,0,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.193978032976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| |||
|short_description=p8@SMAP2 | |||
}} |
Latest revision as of 01:16, 18 September 2015
Short description: | p8@SMAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SMAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_uc001cfj.2, uc010ojh.1_5end |
EntrezGene: | SMAP2 |
HGNC: | 25082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.91e-23 | 136 |
nongranular leukocyte | 1.95e-18 | 115 |
B cell | 2.59e-18 | 14 |
hematopoietic stem cell | 3.80e-17 | 168 |
hematopoietic oligopotent progenitor cell | 6.21e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.21e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 6.74e-16 | 120 |
hematopoietic cell | 7.90e-16 | 177 |
lymphoid lineage restricted progenitor cell | 6.08e-15 | 52 |
lymphocyte | 1.40e-14 | 53 |
common lymphoid progenitor | 1.40e-14 | 53 |
neutrophil | 1.05e-11 | 3 |
granulocyte | 2.15e-11 | 8 |
lymphocyte of B lineage | 5.88e-10 | 24 |
pro-B cell | 5.88e-10 | 24 |
myeloid leukocyte | 3.61e-09 | 72 |
eosinophil | 1.75e-08 | 2 |
blood cell | 3.61e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.03e-08 | 98 |
blood island | 2.03e-08 | 98 |
hemolymphoid system | 3.12e-08 | 108 |
blood | 9.14e-08 | 15 |
haemolymphatic fluid | 9.14e-08 | 15 |
organism substance | 9.14e-08 | 15 |