FFCP PHASE1:Hg19::chr20:19870145..19870166,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPJ1,A1A4T0,Q8WYP3 | |||
|association_with_transcript=-43bp_to_ENST00000440354,ENST00000465815,NM_018993,uc002wro.1,uc010gcu.1_5end | |||
|cluster_id=chr20:19870145..19870166,+ | |||
|description=CAGE_peak_18_at_RIN2_5end | |||
|id=chr20:19870145..19870166,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.52e-12!24;CL:0000071!2.78e-10!18;CL:0002546!2.78e-10!18;CL:0000115!7.39e-09!35;CL:0002078!1.65e-07!44 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.33e-11;4!UBERON:0007284;4.33e-11;4!UBERON:0004872;7.67e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.90e-38!115;UBERON:0000477!1.70e-19!286;UBERON:0004111!1.74e-19!241;UBERON:0001049!1.90e-18!57;UBERON:0005068!1.90e-18!57;UBERON:0006241!1.90e-18!57;UBERON:0007135!1.90e-18!57;UBERON:0003080!7.92e-18!42;UBERON:0000025!1.36e-17!194;UBERON:0002616!3.28e-17!59;UBERON:0002780!6.32e-17!41;UBERON:0001890!6.32e-17!41;UBERON:0006240!6.32e-17!41;UBERON:0003075!1.59e-16!86;UBERON:0007284!1.59e-16!86;UBERON:0000955!2.09e-15!69;UBERON:0006238!2.09e-15!69;UBERON:0002346!3.80e-15!90;UBERON:0001017!1.45e-14!82;UBERON:0002020!2.37e-14!34;UBERON:0003528!2.37e-14!34;UBERON:0005743!2.91e-14!86;UBERON:0001893!4.19e-14!34;UBERON:0001869!8.47e-14!32;UBERON:0002791!1.76e-13!33;UBERON:0002619!2.39e-13!22;UBERON:0003056!1.12e-12!61;UBERON:0000073!2.67e-12!94;UBERON:0001016!2.67e-12!94;UBERON:0000119!5.54e-12!312;UBERON:0001950!1.46e-11!20;UBERON:0000483!1.98e-11!309;UBERON:0000055!2.49e-11!69;UBERON:0002049!3.03e-11!79;UBERON:0007798!3.03e-11!79;UBERON:0000956!3.96e-11!25;UBERON:0000203!3.96e-11!25;UBERON:0000153!6.64e-11!129;UBERON:0007811!6.64e-11!129;UBERON:0001981!1.38e-10!60;UBERON:0007500!1.38e-10!60;UBERON:0004537!1.38e-10!60;UBERON:0006965!1.38e-10!60;UBERON:0001986!2.78e-10!18;UBERON:0004638!2.78e-10!18;UBERON:0004852!2.78e-10!18;UBERON:0004872!4.66e-10!84;UBERON:0000033!7.68e-10!123;UBERON:0000467!1.70e-09!625;UBERON:0000480!2.06e-09!626;UBERON:0000468!3.80e-08!659;UBERON:0004121!6.25e-08!169;UBERON:0000487!1.15e-07!22;UBERON:0001009!1.52e-07!113;UBERON:0004535!1.52e-07!110;UBERON:0000924!2.04e-07!173;UBERON:0006601!2.04e-07!173;UBERON:0000475!2.53e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;3.28e-21;2!UBERON:0002106;8.16e-15;3!UBERON:0003978;1.78e-14;3!UBERON:0000946;1.78e-14;3!UBERON:0002134;1.06e-11;1!UBERON:0005208;1.06e-11;1!UBERON:0004145;1.06e-11;1!UBERON:0005946;1.06e-11;1!UBERON:0005965;1.06e-11;1!UBERON:0002078;1.06e-11;1!UBERON:0001874;2.81e-11;1!UBERON:0000996;2.81e-11;1!UBERON:0002135;2.81e-11;1!UBERON:0002171;2.81e-11;1!UBERON:0006518;2.81e-11;1!UBERON:0008949;2.81e-11;1!UBERON:0000101;2.81e-11;1!UBERON:0002167;2.81e-11;1!UBERON:0004177;2.99e-09;5!UBERON:0005057;2.99e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.25e-21,2;UBERON:0002106,8.19e-15,3;UBERON:0004854,8.19e-15,3;UBERON:0009034,8.19e-15,3;UBERON:0002095,8.19e-15,3;UBERON:0004782,8.19e-15,3;UBERON:0003281,8.19e-15,3;UBERON:0009664,8.19e-15,3;UBERON:0002296,8.19e-15,3;UBERON:0005602,8.19e-15,3;UBERON:0001179,8.19e-15,3;UBERON:0006293,8.19e-15,3;UBERON:0003978,2.12e-14,3;UBERON:0009751,2.12e-14,3;UBERON:0000946,2.12e-14,3;UBERON:0002523,2.12e-14,3;UBERON:0005983,2.12e-14,3;UBERON:0002165,2.12e-14,3;UBERON:0002062,2.12e-14,3;UBERON:0007280,2.12e-14,3;UBERON:0002134,9.57e-12,1;UBERON:0005208,9.57e-12,1;UBERON:0005946,9.57e-12,1;UBERON:0005965,9.57e-12,1;UBERON:0002078,9.57e-12,1;UBERON:0000996,1.97e-11,1;UBERON:0002171,2.42e-11,1;UBERON:0006518,2.42e-11,1;UBERON:0008949,2.42e-11,1;UBERON:0000101,2.42e-11,1;UBERON:0002167,2.42e-11,1;UBERON:0002135,4.01e-11,1;UBERON:0001874,4.91e-11,1;UBERON:0007023,5.76e-09,114;UBERON:0003887,3.25e-08,12;UBERON:0004177,7.68e-07,7;UBERON:0005057,7.68e-07,7 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,0,0.550236083880135,0.208994966536811,0,1.42306505074684,0.66944122552934,0.805658634218294,0.760272105718513,0.732186172644509,0,0.81014194788176,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.732806975721629,0,0,0,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.779160935160341,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.876214728748802,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0.274083849293502,0,0.633107959558787,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0.859530882839914,0,1.11712960508902,0,2.87149209830726,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0.551639951094387,0.367182116944987,0,0,0,0,0,0.5085370753095,0,0.864221491201268,0,0,0,0,0,0,0,1.16354660725395,0.52893040697076,0,0,0.961086713109252,0.78602152549833,1.24271716604159,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.854183854313742,0.625954653532499,0,0.443716206147409,0.372578417648301,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.621051827505038,0,0,1.04349012362347,0.150257608997218,0.761610424337591,0.406870733204662,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,1.41696576325585,0.798169295285756,0.615349092722265,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0.781078098613847,0.413373593002368,0.570742291745161,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.0887023701626388,0,0.171488009437418,0.203909198930495,0.394636641377094,0,0.333694205676207,0.706437835654626,1.09980912941201,0,0.913158720509496,0.215927591218621,0,0.714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,2.53756578545605,4.06084694233536,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.203974470572744,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0.303114792872958,0,1.65833887891756,0.20686599172379,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0,0.435433495793923,0,0.134704106029175,0.286888821570705,0.665320713092027,0,0,0,0.269475606319761,0,0.122241444182866,0,1.33151354837103,0,0 | |||
|short_description=p18@RIN2 | |||
}} |
Latest revision as of 16:09, 24 September 2015
Short description: | p18@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000440354, ENST00000465815, NM_018993, uc002wro.1, uc010gcu.1_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | E7EPJ1A1A4T0Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 4.25e-21 | 2 |
spleen | 8.19e-15 | 3 |
gastrointestinal system mesentery | 8.19e-15 | 3 |
stomach region | 8.19e-15 | 3 |
mesentery | 8.19e-15 | 3 |
gastrointestinal system serosa | 8.19e-15 | 3 |
mesentery of stomach | 8.19e-15 | 3 |
gut mesentery | 8.19e-15 | 3 |
dorsal mesentery | 8.19e-15 | 3 |
dorsal mesogastrium | 8.19e-15 | 3 |
peritoneal cavity | 8.19e-15 | 3 |
spleen primordium | 8.19e-15 | 3 |
valve | 2.12e-14 | 3 |
cardiac mesenchyme | 2.12e-14 | 3 |
cardial valve | 2.12e-14 | 3 |
tunica intima | 2.12e-14 | 3 |
heart layer | 2.12e-14 | 3 |
endocardium | 2.12e-14 | 3 |
endocardial cushion | 2.12e-14 | 3 |
presumptive endocardium | 2.12e-14 | 3 |
tricuspid valve | 9.57e-12 | 1 |
right atrium valve | 9.57e-12 | 1 |
outflow tract of atrium | 9.57e-12 | 1 |
outflow part of right atrium | 9.57e-12 | 1 |
right cardiac atrium | 9.57e-12 | 1 |
vagina | 1.97e-11 | 1 |
lower lobe of right lung | 2.42e-11 | 1 |
right lung lobe | 2.42e-11 | 1 |
lower lobe of lung | 2.42e-11 | 1 |
lobe of lung | 2.42e-11 | 1 |
right lung | 2.42e-11 | 1 |
mitral valve | 4.01e-11 | 1 |
putamen | 4.91e-11 | 1 |
adult organism | 5.76e-09 | 114 |
intraembryonic coelom | 3.25e-08 | 12 |
hemopoietic organ | 7.68e-07 | 7 |
immune organ | 7.68e-07 | 7 |