FFCP PHASE1:Hg19::chr9:117880683..117880699,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:117880683..117880699,-
|short_description=p12@TNC
|description=CAGE_peak_12_at_TNC_5end
|association_with_transcript=-147bp_to_ENST00000350763,NM_002160_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3371 | |EntrezGene=3371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5318 | |HGNC=5318 | ||
|TSSclassifier=strong | |||
|UniProt=P24821,B4E1W8,Q4LE33 | |UniProt=P24821,B4E1W8,Q4LE33 | ||
|association_with_transcript=-147bp_to_ENST00000350763,NM_002160_5end | |||
|cluster_id=chr9:117880683..117880699,- | |||
|description=CAGE_peak_12_at_TNC_5end | |||
|id=chr9:117880683..117880699,- | |||
|ontology_enrichment_celltype=CL:0000128!8.00e-12!7;CL:0000126!8.00e-12!7;CL:0000127!8.00e-12!7;CL:0002453!8.00e-12!7;CL:0000055!4.65e-07!180;CL:0002620!9.54e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002603;3.85e-19;3!CL:0000064;1.62e-18;3!CL:0000067;1.62e-18;3!CL:0005012;1.62e-18;3!CL:0002304;1.62e-18;3!CL:0000128;6.23e-18;7!CL:0000126;6.23e-18;7!CL:0000127;6.23e-18;7!CL:0002319;2.90e-08;25!CL:0000047;4.08e-08;2!CL:0000243;1.02e-07;15!CL:0000125;1.02e-07;15!CL:0000095;5.87e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,3.52e-19,3;CL:0000064,1.14e-18,3;CL:0000067,1.14e-18,3;CL:0005012,1.14e-18,3;CL:0002304,1.14e-18,3;CL:0000128,6.60e-18,7;CL:0000126,6.60e-18,7;CL:0000127,6.60e-18,7;CL:0002453,6.60e-18,7;CL:0000133,3.25e-10,59;CL:0000221,2.56e-08,72;CL:0002319,2.96e-08,25;CL:0000243,1.04e-07,15;CL:0000125,1.04e-07,15;CL:0000030,1.04e-07,15;CL:0000339,1.04e-07,15;CL:0000095,5.99e-07,17;CL:0000123,5.99e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;1.02e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.72e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.62e-18;3!UBERON:0001775;1.62e-18;3!UBERON:0000488;3.85e-14;4!UBERON:0002037;4.75e-10;6!UBERON:0002203;9.67e-10;6!UBERON:0001768;9.67e-10;6!UBERON:0002200;9.67e-10;6!UBERON:0002680;5.52e-07;9!UBERON:0001895;5.52e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.14e-18,3;UBERON:0001775,1.14e-18,3;UBERON:0000488,2.95e-14,4;UBERON:0002037,4.54e-10,6;UBERON:0006215,4.54e-10,6;UBERON:0002203,8.11e-10,6;UBERON:0001768,8.11e-10,6;UBERON:0002200,8.11e-10,6;UBERON:0002680,5.37e-07,9;UBERON:0001895,5.37e-07,9;UBERON:0010092,5.37e-07,9 | |||
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| ||
|short_description=p12@TNC | |||
}} | }} |
Latest revision as of 17:10, 24 September 2015
Short description: | p12@TNC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TNC_5end |
Coexpression cluster: | NA |
Association with transcript: | -147bp_to_ENST00000350763, NM_002160_5end |
EntrezGene: | TNC |
HGNC: | 5318 |
UniProt: | P24821B4E1W8Q4LE33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 3.52e-19 | 3 |
ciliated cell | 1.14e-18 | 3 |
ciliated epithelial cell | 1.14e-18 | 3 |
multi-ciliated epithelial cell | 1.14e-18 | 3 |
non-pigmented ciliary epithelial cell | 1.14e-18 | 3 |
oligodendrocyte | 6.60e-18 | 7 |
macroglial cell | 6.60e-18 | 7 |
astrocyte | 6.60e-18 | 7 |
oligodendrocyte precursor cell | 6.60e-18 | 7 |
neurectodermal cell | 3.25e-10 | 59 |
ectodermal cell | 2.56e-08 | 72 |
neural cell | 2.96e-08 | 25 |
glial cell (sensu Vertebrata) | 1.04e-07 | 15 |
glial cell | 1.04e-07 | 15 |
glioblast | 1.04e-07 | 15 |
glioblast (sensu Vertebrata) | 1.04e-07 | 15 |
neuron associated cell | 5.99e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.99e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.14e-18 | 3 |
ciliary body | 1.14e-18 | 3 |
atypical epithelium | 2.95e-14 | 4 |
cerebellum | 4.54e-10 | 6 |
rhombic lip | 4.54e-10 | 6 |
vasculature of eye | 8.11e-10 | 6 |
uvea | 8.11e-10 | 6 |
vasculature of head | 8.11e-10 | 6 |
regional part of metencephalon | 5.37e-07 | 9 |
metencephalon | 5.37e-07 | 9 |
future metencephalon | 5.37e-07 | 9 |