FFCP PHASE1:Hg19::chr20:46318928..46318954,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:46318928..46318954,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr20:46318928..46318954,- | |||
|id=chr20:46318928..46318954,- | |||
|ontology_enrichment_celltype=CL:0002057!9.16e-13!42;CL:0000860!3.37e-11!45;CL:0002194!1.56e-07!63;CL:0000576!1.56e-07!63;CL:0000040!1.56e-07!63;CL:0000559!1.56e-07!63;CL:0000766!3.89e-07!76;CL:0002009!5.28e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.42e-16;3!CL:0000115;4.20e-08;36!CL:0002138;9.77e-08;6!CL:0002521;2.08e-07;3!CL:0002144;2.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.43e-16,3;CL:0000115,4.44e-09,36;CL:0005020,1.28e-07,6;CL:0002138,1.28e-07,6;CL:0005022,1.28e-07,6;CL:0002521,2.26e-07,3;CL:0002144,2.83e-07,3;CL:0002078,5.73e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;9.77e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.18e-11;4!DOID:1612;1.18e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.86e-12,4;DOID:1612,8.86e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.57e-09!659;UBERON:0007023!1.46e-08!115;UBERON:0000467!1.16e-07!625;UBERON:0000480!1.45e-07!626;UBERON:0002405!5.86e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.08e-07;3!UBERON:0001915;2.08e-07;3!UBERON:0002190;2.08e-07;3!UBERON:0001982;2.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.26e-07,3;UBERON:0010523,2.83e-07,3;UBERON:0001915,2.83e-07,3;UBERON:0001982,2.83e-07,3;UBERON:0004876,3.81e-07,11 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0,0,2.53299878168311,1.26343974685366,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,1.40381113229099,0.868043482863407,0,0,0,1.16318591023652,0.755751887377619,0.485168122375632,0.697287110717054,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0.344745680736619,0.645484683583826,0,1.50593871634084,0.545812300115692,0,2.75475503133812,0.962787081228281,1.27867425159808,0.659702600373432,0.398927315243264,0,0.580418477257168,0,0,0.75374599577023,0,0.65156653411535,0,0.368277635987565,0.632924774881769,0,0.850417199860174,0.209658645508376,0.673971786878971,0.600707571366025,0.64290234678832,0,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,1.5905718941022,0,0.0945348171640679,0,0,0.261958150995425,0,0,0.324547393654683,0.870648686496336,0.664789802594326,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0,1.03366703667732,1.42306505074684,2.00832367658802,1.20848795132744,0,2.19655851793353,1.10298924103761,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.37223371266318,0,0,0,0.552299391853796,0.161646056818812,0.355009592516614,0.10075209822764,0,0.57978255948989,1.36373060295417,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,0,0.8231480226628,0,0,0.982827216677626,0,0,0.245976877086227,0,0.98775256867763,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.380508304469197,2.37061319387782,2.57545848628462,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0,0,3.74503511973591,23.932916736322,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0,0,0.321707842287215,0,0,0,0,0,0,0.362578348774867,2.80709058424599,0.644566922551274,0.114814448164607,0,0,0,0,0,0,0.105551628892876,1.13733384070897,1.36074964221213,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0,0,0.495854746082934,0,0,0.30347334256665,0,0,0,0,0,0,0.37064843820784,0,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.879049075631364,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0.278304294485554,0,1.5625665665114,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.278847488557207,2.07765697960252,0.341826167541004,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.83309043480088,0,0.123563938946503,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,1.51647791108371,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,4.36816670605075,0,0,0,0,1.26085721434945,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0.599428828746391,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0,0,0.272406812223151,0.321506296930038,0.412618309791701,0,0,0,0.121499113316049,0.335434687599266,0.315222829196793,0,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0.879313402068495,0,0,0.13223260174269,0,0,0.320362237703084,0.157204305099666,1.24271716604159,0.992332043623902,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0.353378291891762,0,0,0.512483037175893,0,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.314531883711793,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0.41023272848151,0,0,0.161475645631851,0,0.294443155503077,0,0,0.115525666150338,0,0,0,2.70757182057326,0,0,0,0.327543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| |||
|short_description=p@chr20:46318928..46318954,- | |||
}} |
Latest revision as of 14:48, 28 July 2015
Short description: | p@chr20:46318928..46318954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:46318928..46318954, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.43e-16 | 3 |
endothelial cell | 4.44e-09 | 36 |
lymphangioblast | 1.28e-07 | 6 |
endothelial cell of lymphatic vessel | 1.28e-07 | 6 |
vascular lymphangioblast | 1.28e-07 | 6 |
subcutaneous fat cell | 2.26e-07 | 3 |
capillary endothelial cell | 2.83e-07 | 3 |
meso-epithelial cell | 5.73e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.26e-07 | 3 |
microcirculatory vessel | 2.83e-07 | 3 |
endothelium of capillary | 2.83e-07 | 3 |
capillary | 2.83e-07 | 3 |
urogenital ridge | 3.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.86e-12 | 4 |
breast cancer | 8.86e-12 | 4 |