FFCP PHASE1:Hg19::chr21:16135576..16135586,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr21:16135576..16135586,- | |||
|coexpression_cluster_id=C2032 | |||
|description=CAGE_peak_at_chr21:16135576..16135586,- | |||
|id=chr21:16135576..16135586,- | |||
|ontology_enrichment_celltype=CL:0000945!8.27e-38!24;CL:0000826!8.27e-38!24;CL:0000236!5.23e-28!14;CL:0002087!3.86e-18!119;CL:0000542!9.12e-18!53;CL:0000051!9.12e-18!53;CL:0000738!1.21e-17!140;CL:0000037!2.12e-17!172;CL:0000566!2.12e-17!172;CL:0000988!4.26e-16!182;CL:0000838!9.37e-16!52;CL:0002032!1.63e-15!165;CL:0000837!1.63e-15!165;CL:0002031!4.33e-14!124;CL:0000817!1.11e-07!3;CL:0000842!3.88e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000946;5.05e-34;1!CL:0000786;5.05e-34;1!CL:0000236;1.75e-23;13!CL:0000945;1.82e-22;24!CL:0000542;6.90e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.45e-38,14;CL:0000946,5.05e-34,1;CL:0000786,5.05e-34,1;CL:0000980,5.05e-34,1;CL:0000945,1.72e-22,24;CL:0000826,1.72e-22,24;CL:0000785,9.07e-18,2;CL:0000955,9.07e-18,2;CL:0000818,9.07e-18,2;CL:0000954,9.07e-18,2;CL:0000816,9.07e-18,2;CL:0000817,2.59e-12,3;CL:0000838,1.01e-10,52;CL:0000542,1.57e-10,53;CL:0000051,1.57e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000954;9.07e-18;2!CL:0000051;6.90e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!4.48e-15!3;UBERON:0004854!4.48e-15!3;UBERON:0009034!4.48e-15!3;UBERON:0002095!4.48e-15!3;UBERON:0004782!4.48e-15!3;UBERON:0003281!4.48e-15!3;UBERON:0009664!4.48e-15!3;UBERON:0002296!4.48e-15!3;UBERON:0005602!4.48e-15!3;UBERON:0001179!4.48e-15!3;UBERON:0006293!4.48e-15!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.85e-12;3!UBERON:0004177;5.35e-08;5!UBERON:0005057;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.85e-12,3;UBERON:0004854,1.85e-12,3;UBERON:0009034,1.85e-12,3;UBERON:0002095,1.85e-12,3;UBERON:0004782,1.85e-12,3;UBERON:0003281,1.85e-12,3;UBERON:0009664,1.85e-12,3;UBERON:0002296,1.85e-12,3;UBERON:0005602,1.85e-12,3;UBERON:0001179,1.85e-12,3;UBERON:0006293,1.85e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.164201178899891,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0.612167784741805,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0.426730222566507,1.60158394814405,1.72425731986345,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0,0,0,0,0,0,1.12318871245384,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,3.59788161329744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:16135576..16135586,- | |||
}} |
Latest revision as of 16:44, 28 July 2015
Short description: | p@chr21:16135576..16135586, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:16135576..16135586, - |
Coexpression cluster: | C2032_splenic_hairy_plasma_CD19_B_xeroderma_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.45e-38 | 14 |
antibody secreting cell | 5.05e-34 | 1 |
plasma cell | 5.05e-34 | 1 |
plasmablast | 5.05e-34 | 1 |
lymphocyte of B lineage | 1.72e-22 | 24 |
pro-B cell | 1.72e-22 | 24 |
mature B cell | 9.07e-18 | 2 |
pre-B-II cell | 9.07e-18 | 2 |
transitional stage B cell | 9.07e-18 | 2 |
small pre-B-II cell | 9.07e-18 | 2 |
immature B cell | 9.07e-18 | 2 |
precursor B cell | 2.59e-12 | 3 |
lymphoid lineage restricted progenitor cell | 1.01e-10 | 52 |
lymphocyte | 1.57e-10 | 53 |
common lymphoid progenitor | 1.57e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.85e-12 | 3 |
gastrointestinal system mesentery | 1.85e-12 | 3 |
stomach region | 1.85e-12 | 3 |
mesentery | 1.85e-12 | 3 |
gastrointestinal system serosa | 1.85e-12 | 3 |
mesentery of stomach | 1.85e-12 | 3 |
gut mesentery | 1.85e-12 | 3 |
dorsal mesentery | 1.85e-12 | 3 |
dorsal mesogastrium | 1.85e-12 | 3 |
peritoneal cavity | 1.85e-12 | 3 |
spleen primordium | 1.85e-12 | 3 |