FFCP PHASE1:Hg19::chr2:228028941..228028957,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1286 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2206 | |||
|TSSclassifier=strong | |||
|UniProt=P53420 | |||
|association_with_transcript=-112bp_to_ENST00000329662,ENST00000396625_5end | |||
|cluster_id=chr2:228028941..228028957,- | |||
|description=CAGE_peak_2_at_COL4A4_5end | |||
|id=chr2:228028941..228028957,- | |||
|ontology_enrichment_celltype=CL:0000236!1.41e-08!14;CL:0000945!8.37e-07!24;CL:0000826!8.37e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.79e-11;13!CL:0000945;2.76e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.78e-11,14;CL:0000945,2.45e-09,24;CL:0000826,2.45e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.80e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-19!115;UBERON:0000477!5.67e-15!286;UBERON:0000064!8.77e-13!219;UBERON:0000481!3.62e-12!347;UBERON:0000025!1.57e-10!194;UBERON:0004111!3.49e-10!241;UBERON:0003103!1.57e-08!69;UBERON:0000483!2.92e-08!309;UBERON:0000119!5.32e-08!312;UBERON:0003075!9.29e-08!86;UBERON:0007284!9.29e-08!86;UBERON:0007100!2.46e-07!27;UBERON:0001048!2.54e-07!168;UBERON:0000062!7.35e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.03e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,5.24e-11,68;UBERON:0007023,6.69e-10,114;UBERON:0001048,9.34e-09,160;UBERON:0007100,2.83e-08,27 | |||
|phase1_expression=2.18014055124668,3.63970890614671,0.704772020479856,7.00513088471913,0,5.23403114460221,0,0.631719873426831,0,4.17747692052565,5.58240934377942,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,1.42169232487422,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,7.64594055766984,8.00558328477199,4.26730222566507,6.4063357925762,4.59801951963587,5.2883589822789,0.954053754535364,7.39976859842283,6.45960908308033,9.55683070313072,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,0,4.85877735005415,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.351339142772504,2.61958150995425,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,2.02608818663328,1.05927344650575,5.73673241497627,0.709336764396714,0,0,0,0.622422070799533,0.404132016209064,0.326923806226917,3.48122083583342,2.88087962239999,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,2.40380894250555,0.453728732640084,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.573609190778008,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0,0,1.53798840051797,2.69735504124963,1.44606617930089,1.8749975364507,2.61455332910887,1.89816495288877,2.02246962240247,1.56977172100277,0.769494313892781,0,0,0.8231480226628,0,0,0,1.77236972004421,0,0,0.686271241194102,0,0,0,0,0,0,0,0.811512834825538,3.40485213283883,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,1.03417372606222,0,0,0.531876233169741,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0.871533458600294,1.29964888536674,0,0,0,0,2.29723871668228,0,0.579125226670317,0.205476322550383,0.895304816199478,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.315404830067869,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,6.65741758041988,0,0.744323423456331,5.21770709179412,0.561320188866147,0.512556597022804,4.60536524160033,0.321707842287215,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,2.25599806453706,1.92538342761037,2.35304930753057,2.92278449306521,1.58327443339314,0,0,0,0,0.270946437543853,0,4.07802036872061,7.47968408035852,0,0,0,1.02580050046556,3.60816110269676,0.325378394664303,2.16386124460217,0,0.165018999841176,0,0,19.2820715812991,0,0.154048617114644,0.460511024178389,0.275673144969061,0.537101224341368,0.290033387828457,0,0,0.165284915360978,0.576570202095319,0.765676274967505,0.4046311234222,0,1.88887408098384,0,1.84820148105653,0.532306030317022,0.869932992075073,0.18532421910392,3.14874750832381,0.744316738719335,0.949138274156178,1.90630193923825,0,1.28381696410176,0,0,0,0,0.117812402345686,0.606547444719948,1.58510321173008,1.68503382495592,0,2.68084838594413,2.11300293513511,0,0,4.52032466480971,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0.202910376962704,0,0.563391205064483,0.286822704408103,0,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,1.22386941009813,0,3.36942951335251,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,1.23408681925858,0,0,0,0,0,0.245040215981032,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,10.4798702628603,0,0,0,0,10.027268358983,1.48482340416319,7.06469614828234,0,0.281338832821026,0.222617410045812,0.329607748453519,0,7.17292757703851,6.07824614168525,0,0,0,0.933118762985422,1.79736702294654,6.80280463767315,0,1.67693789582787,0,1.11136990144637,0,0,0,0,0,0,0,0.508507300585533,1.41832609060762,0.344743373241465,1.16641845353302,0,0,0,1.52581736317083,0.331737779793674,0,0.438770794307945,0.980446171670911,0.41827123283581,0.692552326534174,4.10191401049204,0,0,0,3.19001159731919,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,2.10998064528027,2.61172493054636,0.424059214301822,0,0,0.442287822516696,0.611030144933625,0,0,0,0.539209063845416,2.40773294189637,0.468528891450678,3.46664099509765,0,0,7.89168805698781,3.62972148145992,0.30607276163049,3.34888872030986,0.150323419414493,0.414752765588989,0,0,0,0,0.284609546029793,0,0,0,1.04471047896483,3.66926003308263,0,2.70917727609438,2.26576882967175,2.13500188338344,0.872901148395775,0.0882561266915003,2.93774963014692,0,0,0.379864775735272,0.782205530939212,1.92381168603681,6.83049583165928,0,0,0.916292769327325,3.26030495937733,0,0,1.41416420770077,0,0.104602846312333,0,0,0.600420288709789,0.958337652243951,0,1.71906176567983,3.15464825135177,9.21631924198439,5.95817102430378,9.33234931949858,1.79711100449092,5.15071257763885,3.79391477651183,1.81395375714161,5.04419836959365,0,0,0,0,0,0,0.7952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| |||
|short_description=p2@COL4A4 | |||
}} |
Latest revision as of 03:34, 25 September 2015
Short description: | p2@COL4A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL4A4_5end |
Coexpression cluster: | NA |
Association with transcript: | -112bp_to_ENST00000329662, ENST00000396625_5end |
EntrezGene: | COL4A4 |
HGNC: | 2206 |
UniProt: | P53420 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.78e-11 | 14 |
lymphocyte of B lineage | 2.45e-09 | 24 |
pro-B cell | 2.45e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
compound organ | 5.24e-11 | 68 |
adult organism | 6.69e-10 | 114 |
primordium | 9.34e-09 | 160 |
primary circulatory organ | 2.83e-08 | 27 |