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FFCP PHASE1:Mm9::chr10:74674903..74674932,+: Difference between revisions

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{{FFCP|EntrezGene=74392|HGNC=|MCL_coexpression_id=24|UniProt=Q2KN98,Q6GQV8,Q8C9Q9|association_with_transcript=85bp_to_ENSMUST00000105421,NM_153406,uc007fqd.1,uc007fqe.2_5end|description=CAGE_peak_2_at_Specc1l_5end|id=chr10:74674903..74674932,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!5.98e-15!128;UBERON:0001555!5.98e-15!128;UBERON:0007026!5.98e-15!128;UBERON:0005409!1.48e-14!59;UBERON:0004119!3.75e-14!130;UBERON:0000925!3.75e-14!130;UBERON:0006595!3.75e-14!130;UBERON:0004921!5.64e-14!126;UBERON:0004185!5.64e-14!126;UBERON:0000160!1.65e-12!43;UBERON:0000344!7.27e-09!15;UBERON:0004923!6.68e-08!24;UBERON:0001242!8.47e-08!13;UBERON:0000060!8.47e-08!13;UBERON:0001262!8.47e-08!13;UBERON:0004786!8.47e-08!13;UBERON:0005153!1.08e-07!17;UBERON:0002048!3.08e-07!14;UBERON:0000117!3.08e-07!14;UBERON:0000171!3.08e-07!14;UBERON:0000170!3.08e-07!14;UBERON:0005597!3.08e-07!14;UBERON:0000118!3.08e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.90e-18,47;UBERON:0000160,5.89e-17,31;UBERON:0001007,7.56e-16,116;UBERON:0001555,7.56e-16,116;UBERON:0007026,7.56e-16,116;UBERON:0004119,4.56e-15,118;UBERON:0000925,4.56e-15,118;UBERON:0006595,4.56e-15,118;UBERON:0004921,9.91e-15,114;UBERON:0000344,2.46e-10,15;UBERON:0004923,4.58e-09,24;UBERON:0001242,4.68e-09,13;UBERON:0001262,4.68e-09,13;UBERON:0004786,4.68e-09,13;UBERON:0005153,8.72e-09,17;UBERON:0002048,3.12e-08,14;UBERON:0000117,3.12e-08,14;UBERON:0000171,3.12e-08,14;UBERON:0000170,3.12e-08,14;UBERON:0005597,3.12e-08,14;UBERON:0000118,3.12e-08,14;UBERON:0005157,3.54e-07,20|phase1_expression=0.640595388419176,41.528073509084,40.0399330662792,51.7213801334679,57.6030089438299,15.9485308316295,11.2134067485852,0.516493293766305,1.54867594366833,1.63845168425395,0,0.0797721589953364,0.342401459862411,0.0874204024189974,1.33243904726265,0.607425802169478,2.09868563438444,2.99689057090326,1.37114433605739,2.12194825899015,1.61582251287033,0.397163804803541,0.522399578277871,15.0392877425802,11.2410547722913,28.711598205751,26.2764817657036,17.2376986148711,16.5320374927045,17.6421090831952,17.2949798311138,0.635030673459631,0,0,2.02196133825892,1.49611180822643,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,4.40638862914521,3.04130793658544,1.83546752161682,0,0.218025156380447,1.5378032791413,1.1665793944457,1.39986421625363,0,1.8456086666351,0.725362142011344,0.336093799142464,1.02903774414379,1.43266719969378,2.06268836910977,0.606949382578793,0.528990979272033,0,1.35537812827653,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0.207379224616955,1.21505344498522,1.05162480675691,0.856952953211411,0.441737081903227,1.22490799214954,0.766763768145891,1.83843757322004,1.10115880999389,0.255374676170375,0.614426133024974,0.527545150920775,0.457438218012048,0.52091337055676,1.67509799400829,0,0,1.17851434189467,0.569486723196412,0.186399445825301,0.37863096666592,0.604572480854284,0.579728977403356,0,1.3599426674155,2.69851595818909,0.649776417447669,1.79210754838934,1.82577746171277,0.852151612890289,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,0.760079596425296,0.505524445014783,5.1382745873577,2.07150306917737,0.890652834388949,0.867426633830679,1.21786191324856,0.230615497256059,0.452167921657868,0.705532242814229,0.753999547978053,2.47194967734374,1.73519228303894,0,0,0.441683036920787,0.969750506270444,1.86391761218122,2.34224637609238,2.72280718857492,20.4365644166873,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0.628271760564322,0,0.767146371990992,0.20778804455956,0.648965052271031,0.611036183101898,1.11966273549084,0,2.94618598241064,1.04096354370163,0.919608417733892,0.720248519221397,0.60281927134286,0.544291993210623,0.384341160854549,0.655912071918102,1.55222022443409,0.215567992932842,1.70195472151037,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0.568326998791185,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.324275238183423,0.438599962275997,0.878200461164203,0.402619256281115,0.210289948564127,0.514523061896422,51.2149113624887,15.3381328664856,1.06644125267617,0.696710015581316,1.41754207454303,2.42020229548011,4.44756087689741,3.42406127002606,17.5575752771469,6.75265714368445,4.77536896720512,4.57599885694647,6.82374304916921,22.4704852163555,25.7204279350886,21.1089749649629,0.379335801906163,0.685491075658373,1.1270773567308,1.4255592949172,0.775809948670503,0.49095073923223,0.948548056863859,1.32849133181642,0.941992367048249,1.23397163921801,0.889357881261447,1.16791574001266,0.786235980452812,0.899448449539415,0.811440485554012,1.20588579876208,2.03700681425136,1.43848068725405,0.162135226775035,1.37280706594041,2.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74392
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=Q2KN98,Q6GQV8,Q8C9Q9
|association_with_transcript=85bp_to_ENSMUST00000105421,NM_153406,uc007fqd.1,uc007fqe.2_5end
|cluster_id=chr10:74674903..74674932,+
|description=CAGE_peak_2_at_Specc1l_5end
|id=chr10:74674903..74674932,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.90e-18,47;UBERON:0000160,5.89e-17,31;UBERON:0001007,7.56e-16,116;UBERON:0001555,7.56e-16,116;UBERON:0007026,7.56e-16,116;UBERON:0004119,4.56e-15,118;UBERON:0000925,4.56e-15,118;UBERON:0006595,4.56e-15,118;UBERON:0004921,9.91e-15,114;UBERON:0000344,2.46e-10,15;UBERON:0004923,4.58e-09,24;UBERON:0001242,4.68e-09,13;UBERON:0001262,4.68e-09,13;UBERON:0004786,4.68e-09,13;UBERON:0005153,8.72e-09,17;UBERON:0002048,3.12e-08,14;UBERON:0000117,3.12e-08,14;UBERON:0000171,3.12e-08,14;UBERON:0000170,3.12e-08,14;UBERON:0005597,3.12e-08,14;UBERON:0000118,3.12e-08,14;UBERON:0005157,3.54e-07,20
|phase1_expression=0.640595388419176,41.528073509084,40.0399330662792,51.7213801334679,57.6030089438299,15.9485308316295,11.2134067485852,0.516493293766305,1.54867594366833,1.63845168425395,0,0.0797721589953364,0.342401459862411,0.0874204024189974,1.33243904726265,0.607425802169478,2.09868563438444,2.99689057090326,1.37114433605739,2.12194825899015,1.61582251287033,0.397163804803541,0.522399578277871,15.0392877425802,11.2410547722913,28.711598205751,26.2764817657036,17.2376986148711,16.5320374927045,17.6421090831952,17.2949798311138,0.635030673459631,0,0,2.02196133825892,1.49611180822643,1.22501613757421,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,4.40638862914521,3.04130793658544,1.83546752161682,0,0.218025156380447,1.5378032791413,1.1665793944457,1.39986421625363,0,1.8456086666351,0.725362142011344,0.336093799142464,1.02903774414379,1.43266719969378,2.06268836910977,0.606949382578793,0.528990979272033,0,1.35537812827653,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0.207379224616955,1.21505344498522,1.05162480675691,0.856952953211411,0.441737081903227,1.22490799214954,0.766763768145891,1.83843757322004,1.10115880999389,0.255374676170375,0.614426133024974,0.527545150920775,0.457438218012048,0.52091337055676,1.67509799400829,0,0,1.17851434189467,0.569486723196412,0.186399445825301,0.37863096666592,0.604572480854284,0.579728977403356,0,1.3599426674155,2.69851595818909,0.649776417447669,1.79210754838934,1.82577746171277,0.852151612890289,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,0.760079596425296,0.505524445014783,5.1382745873577,2.07150306917737,0.890652834388949,0.867426633830679,1.21786191324856,0.230615497256059,0.452167921657868,0.705532242814229,0.753999547978053,2.47194967734374,1.73519228303894,0,0,0.441683036920787,0.969750506270444,1.86391761218122,2.34224637609238,2.72280718857492,20.4365644166873,0.479260498023681,0.599902730993408,0.381210681219194,0,0,0.628271760564322,0,0.767146371990992,0.20778804455956,0.648965052271031,0.611036183101898,1.11966273549084,0,2.94618598241064,1.04096354370163,0.919608417733892,0.720248519221397,0.60281927134286,0.544291993210623,0.384341160854549,0.655912071918102,1.55222022443409,0.215567992932842,1.70195472151037,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0.568326998791185,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.324275238183423,0.438599962275997,0.878200461164203,0.402619256281115,0.210289948564127,0.514523061896422,51.2149113624887,15.3381328664856,1.06644125267617,0.696710015581316,1.41754207454303,2.42020229548011,4.44756087689741,3.42406127002606,17.5575752771469,6.75265714368445,4.77536896720512,4.57599885694647,6.82374304916921,22.4704852163555,25.7204279350886,21.1089749649629,0.379335801906163,0.685491075658373,1.1270773567308,1.4255592949172,0.775809948670503,0.49095073923223,0.948548056863859,1.32849133181642,0.941992367048249,1.23397163921801,0.889357881261447,1.16791574001266,0.786235980452812,0.899448449539415,0.811440485554012,1.20588579876208,2.03700681425136,1.43848068725405,0.162135226775035,1.37280706594041,2.87536413054709,1.48856379067401,1.24815069245824,2.02063102357689,1.61457672169721,0.482443521363367,9.79191907883005,0.568474235311454,2.44447464663039,2.54617628662782,1.64283173801951,6.365237782789,8.56957107189649,18.5376965464909,19.2314875809553,23.6967217924189,23.4398509926506,21.3022309130459,20.5495128420416,15.7667473853848,6.03165135757089,0,1.96705709207614,1.10374698521893,0.481651769963376,1.17211686592203,0.327869890753351,1.00988370881749,1.26203287766503,0.780877488593277,0.861693590931196,1.19484398976276,0.445597348164788,0.566153061577665,0.809621403349789,2.04579100537918,1.58115111178609,0.321321316421807,0.709700426041343,0.534196811001766,0,1.64970122972535,7.96470830039777,0.242780636154981,0.906970670894253,0.754420319023592,1.47650946440386,0.922305443831782,2.84271122485043,1.09060118843252,0.712994756769443,2.52829406348653,1.05418608574999,0,0.340439605753788,0.18006109403131,0.388076051348264,0,0.354680467284547,0.356737635204141,0.493647061806363,0.608929898229199,0,0.63549621259146,2.42581237860458,1.81374878235628,0,1.62844897306021,2.26807453605959,2.79039529566604,13.4081184849731,1.29797711407357,2.05045056957423,1.23832120777933,0.740778109478847,2.26042148405629,1.36694227721025,1.83022538565218,0.169978429993855,0.419854356970974,0.276399947608848,1.90934123603023,0.316335993581135,1.82987520414164,0.648032044930808,1.46361807210128,1.31017538247707,1.88810084938749,1.57041565878138,2.6175594198403,14.7761069552644,0,0,0.897099276263873,0.827292452285488,0.194451188344048,0.645799117388655,1.18269287843545,0.58678619322877,0.39061315453185,0.943734099831398,0.241584120826006,0,0.316011120628178,0.810900861160657,0.410843828659309,0.77952493786677,0.358053391334963,1.19208812868759,0.480781798079875,0.590758108698309,0.807731599585181,0.914481679859998,0.201652370273681,0.682205165178267,0.673482891482306,0.584384510907845,0.226730383615211,0.443971906748129,1.34570784914214,1.00730769818447,1.35232715822533,1.12609485270709,0.36630324853453,1.07184189539533,3.51100472824754,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0,0,0.675022500231806,0,0.453142408984205,0,1.03787347584177,0.399024873401031,0.682934423016537,1.45864030240976,0.628839487883947,0.551530525350042,0.888986911206461,0.618105171716683,0.962757628775446,1.76888048234658,1.52087579934144,1.69763707247469,1.21733959710847,1.53660365771686,1.20614484806788,0.952587382566147,1.50649623728312,0.964546102318525,1.23625770240992,1.03039244094078,1.37147700954166,1.4198064492747,0.953744759789284,0.726732083161643,0.658765662907314,1.35383372626682,1.46342378298218,1.8414879800649,1.08643291076689,0.561142271657738,1.89816028998679,0.788035859004508,0.409231043169689,1.70430525304563,0.964533054905707,0,1.87145286756327,1.28922632428979,0.382576664137687,1.32354851471709,0.927471342481686
|short_description=p2@Specc1l
}}

Latest revision as of 06:50, 26 September 2015

Short description:p2@Specc1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Specc1l_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 85bp_to_ENSMUST00000105421, NM_153406, uc007fqd.1, uc007fqe.2_5end
EntrezGene:Specc1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Specc1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I541.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I640.04
CD326+ enterocyte, pool1.CNhs13542.11848-124I351.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I457.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.24
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I126.28
GP2+ M cell, pool3.CNhs13240.11847-124I217.24
Ileum epithelium, pool1.CNhs13199.10252-104B916.53
Ileum epithelium, pool2.CNhs13232.10253-104C117.64
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H720.44
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I351.21
intestine, adult.CNhs10496.178-9A315.34
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D117.56
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E325.72
intestine, neonate N30.CNhs11131.1384-42G121.11
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C618.54
lung, neonate N06.CNhs11212.683-20E519.23
lung, neonate N07.CNhs11111.715-19A323.70
lung, neonate N10.CNhs11219.750-23E623.44
lung, neonate N20.CNhs11109.822-18A421.30
lung, neonate N25.CNhs11119.1359-25C720.55
lung, neonate N30.CNhs11133.1394-42H215.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I113.41
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I114.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system3.90e-1847
intestine5.89e-1731
digestive system7.56e-16116
digestive tract7.56e-16116
primitive gut7.56e-16116
endoderm-derived structure4.56e-15118
endoderm4.56e-15118
presumptive endoderm4.56e-15118
subdivision of digestive tract9.91e-15114
mucosa2.46e-1015
organ component layer4.58e-0924
intestinal mucosa4.68e-0913
wall of intestine4.68e-0913
gastrointestinal system mucosa4.68e-0913
epithelial bud8.72e-0917
lung3.12e-0814
respiratory tube3.12e-0814
respiration organ3.12e-0814
pair of lungs3.12e-0814
lung primordium3.12e-0814
lung bud3.12e-0814
epithelial fold3.54e-0720
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