FFCP PHASE1:Hg19::chr2:46857387..46857388,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:46857387..46857388,- | |||
|description=CAGE_peak_at_chr2:46857387..46857388,- | |||
|id=chr2:46857387..46857388,- | |||
|ontology_enrichment_celltype=CL:0002150!1.14e-07!3;CL:0000861!1.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002521;2.30e-30;3!CL:0000136;6.00e-16;13!CL:0002617;2.59e-12;2!CL:0002144;1.21e-08;3!CL:0000346;1.21e-08;3!CL:1000428;1.21e-08;3!CL:0002577;1.21e-08;3!CL:0002580;1.21e-08;3!CL:0002594;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,3.59e-30,3;CL:0000136,7.35e-14,15;CL:0002617,2.59e-12,2;CL:0002577,9.66e-09,3;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3;CL:0002144,1.30e-08,3;CL:0002580,1.40e-08,3;CL:0002594,7.70e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.48e-12;2!DOID:4236;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.48e-12,2;DOID:4236,1.48e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000310!6.76e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.30e-30;3!UBERON:0002072;1.13e-18;5!UBERON:0000310;9.23e-10;10!UBERON:0001443;5.86e-09;11!UBERON:0010523;1.21e-08;3!UBERON:0000412;1.21e-08;3!UBERON:0001915;1.21e-08;3!UBERON:0001992;1.21e-08;3!UBERON:0001982;1.21e-08;3!UBERON:0001013;2.77e-07;14!UBERON:0001987;8.61e-07;4!UBERON:0001310;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.59e-30,3;UBERON:0002072,1.48e-18,5;UBERON:0000310,1.01e-09,10;UBERON:0001443,6.35e-09,11;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0010523,1.30e-08,3;UBERON:0001915,1.30e-08,3;UBERON:0001982,1.30e-08,3;UBERON:0001013,3.04e-07,14;UBERON:0001987,7.27e-07,4;UBERON:0004340,7.27e-07,4;UBERON:0001310,7.70e-07,4 | |||
|phase1_expression=0,1.2846031433459,0,0,0,0,2.53299878168311,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0,0,0,0,1.66435439510497,0,0,0,1.12264037773229,0,0.511707249066704,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,1.54911749049875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0.511164065356265,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0.249960815924213,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58653788384978,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:46857387..46857388,- | |||
}} |
Latest revision as of 10:31, 29 July 2015
Short description: | p@chr2:46857387..46857388, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46857387..46857388, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 3.59e-30 | 3 |
fat cell | 7.35e-14 | 15 |
adipocyte of breast | 2.59e-12 | 2 |
placental epithelial cell | 9.66e-09 | 3 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
capillary endothelial cell | 1.30e-08 | 3 |
preadipocyte of the breast | 1.40e-08 | 3 |
smooth muscle cell of the umbilical artery | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.59e-30 | 3 |
hypodermis | 1.48e-18 | 5 |
breast | 1.01e-09 | 10 |
chest | 6.35e-09 | 11 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
microcirculatory vessel | 1.30e-08 | 3 |
endothelium of capillary | 1.30e-08 | 3 |
capillary | 1.30e-08 | 3 |
adipose tissue | 3.04e-07 | 14 |
placenta | 7.27e-07 | 4 |
allantois | 7.27e-07 | 4 |
umbilical artery | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.48e-12 | 2 |
carcinosarcoma | 1.48e-12 | 2 |