FFCP PHASE1:Mm9::chr11:67400022..67400048,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14457|HGNC=|UniProt=Q3U432,Q0VBR8,Q3U8N2|association_with_transcript=0bp_to_ENSMUST00000108682,NM_001109657,uc011xwo.1_5end|description=CAGE_peak_5_at_Gas7_5end|id=chr11:67400022..67400048,+|ontology_enrichment_celltype=CL:0000107!2.26e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.50e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.51e-08!11;UBERON:0000991!3.02e-08!18;UBERON:0005564!3.02e-08!18;UBERON:0004176!1.05e-07!17;UBERON:0009196!1.05e-07!17;UBERON:0009117!1.05e-07!17;UBERON:0005156!1.09e-07!26;UBERON:0000990!1.09e-07!26;UBERON:0003133!1.98e-07!24;UBERON:0000473!2.26e-07!14;UBERON:0002410!2.26e-07!9;UBERON:0000468!8.37e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.79e-10,11;UBERON:0000991,2.95e-09,18;UBERON:0005564,2.95e-09,18;UBERON:0004176,1.30e-08,17;UBERON:0009196,1.30e-08,17;UBERON:0009117,1.30e-08,17;UBERON:0002410,1.50e-08,9;UBERON:0000473,3.43e-08,14;UBERON:0005156,8.29e-08,26;UBERON:0000990,8.29e-08,26;UBERON:0002323,1.11e-07,37;UBERON:0004458,1.11e-07,37;UBERON:0003133,1.76e-07,24;UBERON:0003135,2.82e-07,15;UBERON:0003886,3.19e-07,38;UBERON:0003101,3.78e-07,16;UBERON:0000079,3.78e-07,16;UBERON:0002553,8.60e-07,39|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0.297872853602656,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,3.14268486780495,0.183546752161682,0,0.218025156380447,1.09843091367236,1.36100929351998,0.839918529752175,0,0,0,0,5.91696702882678,1.71920063963254,0.515672092277442,0.202316460859598,0,0,1.69422266034566,2.66788438833342,1.7997994345628,1.97773272513395,4.2628806896766,5.99200221036809,3.45796474789399,0,0,0.420649922702764,3.71346279724945,8.1721360152097,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.768032666281217,0.263772575460388,0.274462930807229,0,0,0.56276261003168,0.916789486660861,6.48182888042069,7.83044244395066,1.1183966749518,23.3236675466207,21.9913239910746,0,0,0.679971333707751,0,0.649776417447669,0,0.702222100658759,0,0,0,36.9009759814903,0,0,0,0,0,0,0.34255163915718,2.58937883647172,0.742210695324124,1.56136794089522,2.13125834818499,3.68984795609694,2.86373017049983,4.11560474974967,1.25666591329675,0,3.7595832799177,0,2.91180329905337,0.662524555381181,1.93950101254089,1.86391761218122,1.17112318804619,1.25668024088073,0,0,0.599902730993408,0,0.599162557619291,0,0,0.173824320192276,0.511430914660661,0.83115217823824,0.162241263067758,1.52759045775474,1.24406970610093,0,0.420883711772948,0.390361328888111,0.459804208866946,0,1.35634336052144,0.136072998302656,1.15302348256365,1.87403449119458,1.55222022443409,0.646703978798527,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,2.089512999133,1.4404749548556,9.75267907410617,0.702213187313235,0,0.852490498186778,0.828503090142008,0.703578179943289,1.62055855314913,1.65721314909647,1.18058539048442,1.3884040159864,1.16266972375204,1.3413670069981,0.817357396570186,1.97471819896177,2.29834449710733,2.02672023864639,3.50879969820798,5.26920276698522,1.47627060636409,0.630869845692382,0.823236899034275,0.330418782983798,0.264450566663544,1.06644125267617,0.232236671860439,2.06187938115349,0.80673409849337,0.667134131534611,0.570676878337677,1.89811624617805,0.823494773620054,0.754005626400808,2.18852119245266,1.75467678407208,0.898819408654221,1.51296634912286,0.199141273254367,0.189667900953082,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.316182685621286,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0.405720242777006,0,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0.37898282354097,0.977789858652155,0.509235257325564,0,0.335012514883631,0.238043640886014,0.585400943573396,0.315270288212382,0.8858587585951,0.956728611944923,0.983179888294428,2.07221978239075,0.578596234326046,36.1899081454253,22.3001330365671,0.491764273019036,1.65562047782839,1.12385412991454,0.35163505977661,6.55739781506702,1.76729649043061,22.085575359138,21.4741309363151,37.9145180009726,62.1318874676635,72.1867704026957,80.3937347440284,29.9559919239422,35.0707029493574,30.4371589018823,4.81981974632711,2.98074178937364,1.42452482933804,1.46598263418218,2.47455184458803,5.30980553359851,1.94224508923985,0.906970670894253,0.188605079755898,2.36241514304618,1.84461088766356,1.03371317267288,3.99887102425256,5.70395805415554,3.16036757935816,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.258717367565509,1.07168517515796,0.709360934569094,1.24858172321449,1.81003922662333,1.8267896946876,6.57080782578389,0.42366414172764,1.10264199027481,2.80306630000516,2.58343082713449,4.22190474497091,1.90995750405018,3.11867709515616,0.874442509889552,1.29797711407357,0,0.412773735926445,0,0,0,0,0,0,0,0,0.949007980743406,1.82987520414164,1.29606408986162,1.04544148007234,1.31017538247707,2.29269388854195,2.81021749466142,2.87931536182433,1.16653475962614,0.621339313086926,5.07323644815771,38.8743019714345,26.9697339445069,28.1954223098869,26.7360834598903,32.6085322197202,27.6963083203979,50.3890969346087,41.0000036704529,14.0118790079084,10.0810502190253,0.316011120628178,0.810900861160657,0.616265742988964,0.25984164595559,0.895133478337407,0,0.240390899039938,0.295379054349154,0.605798699688886,0,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,4.25017106870819,15.9530104133505,0.915758121336325,0.643105137237198,0.501572104035363,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0.415149390336707,0.399024873401031,0.512200817262403,1.21553358534147,1.46729213839588,1.47074806760011,1.55572709461131,2.47242068686673,1.28367683836726,2.52697211763797,1.77435509923168,2.26351609663291,1.12369808963859,1.6646539625266,1.83793500657962,1.90517476513229,1.50649623728312,1.92909220463705,0.824171801606613,2.06078488188156,1.37147700954166,1.06485483695602,1.43061713968393,2.32554266611726,1.03520318456864,2.36920902096694,2.74391959309159,2.10455769150274,1.90125759384206,1.68342681497322,1.77952527186261,2.36410757701352,2.86461730218783,2.01417893541756,1.92906610981141,1.49886346762768,2.8071793013449,1.93383948643468,3.06061331310149,4.19123696327079,3.70988536992674|short_description=p5@Gas7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14457 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3U432,Q0VBR8,Q3U8N2 | |||
|association_with_transcript=0bp_to_ENSMUST00000108682,NM_001109657,uc011xwo.1_5end | |||
|cluster_id=chr11:67400022..67400048,+ | |||
|description=CAGE_peak_5_at_Gas7_5end | |||
|id=chr11:67400022..67400048,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.26e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.50e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.51e-08!11;UBERON:0000991!3.02e-08!18;UBERON:0005564!3.02e-08!18;UBERON:0004176!1.05e-07!17;UBERON:0009196!1.05e-07!17;UBERON:0009117!1.05e-07!17;UBERON:0005156!1.09e-07!26;UBERON:0000990!1.09e-07!26;UBERON:0003133!1.98e-07!24;UBERON:0000473!2.26e-07!14;UBERON:0002410!2.26e-07!9;UBERON:0000468!8.37e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.79e-10,11;UBERON:0000991,2.95e-09,18;UBERON:0005564,2.95e-09,18;UBERON:0004176,1.30e-08,17;UBERON:0009196,1.30e-08,17;UBERON:0009117,1.30e-08,17;UBERON:0002410,1.50e-08,9;UBERON:0000473,3.43e-08,14;UBERON:0005156,8.29e-08,26;UBERON:0000990,8.29e-08,26;UBERON:0002323,1.11e-07,37;UBERON:0004458,1.11e-07,37;UBERON:0003133,1.76e-07,24;UBERON:0003135,2.82e-07,15;UBERON:0003886,3.19e-07,38;UBERON:0003101,3.78e-07,16;UBERON:0000079,3.78e-07,16;UBERON:0002553,8.60e-07,39 | |||
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0.297872853602656,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,3.14268486780495,0.183546752161682,0,0.218025156380447,1.09843091367236,1.36100929351998,0.839918529752175,0,0,0,0,5.91696702882678,1.71920063963254,0.515672092277442,0.202316460859598,0,0,1.69422266034566,2.66788438833342,1.7997994345628,1.97773272513395,4.2628806896766,5.99200221036809,3.45796474789399,0,0,0.420649922702764,3.71346279724945,8.1721360152097,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.768032666281217,0.263772575460388,0.274462930807229,0,0,0.56276261003168,0.916789486660861,6.48182888042069,7.83044244395066,1.1183966749518,23.3236675466207,21.9913239910746,0,0,0.679971333707751,0,0.649776417447669,0,0.702222100658759,0,0,0,36.9009759814903,0,0,0,0,0,0,0.34255163915718,2.58937883647172,0.742210695324124,1.56136794089522,2.13125834818499,3.68984795609694,2.86373017049983,4.11560474974967,1.25666591329675,0,3.7595832799177,0,2.91180329905337,0.662524555381181,1.93950101254089,1.86391761218122,1.17112318804619,1.25668024088073,0,0,0.599902730993408,0,0.599162557619291,0,0,0.173824320192276,0.511430914660661,0.83115217823824,0.162241263067758,1.52759045775474,1.24406970610093,0,0.420883711772948,0.390361328888111,0.459804208866946,0,1.35634336052144,0.136072998302656,1.15302348256365,1.87403449119458,1.55222022443409,0.646703978798527,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,2.089512999133,1.4404749548556,9.75267907410617,0.702213187313235,0,0.852490498186778,0.828503090142008,0.703578179943289,1.62055855314913,1.65721314909647,1.18058539048442,1.3884040159864,1.16266972375204,1.3413670069981,0.817357396570186,1.97471819896177,2.29834449710733,2.02672023864639,3.50879969820798,5.26920276698522,1.47627060636409,0.630869845692382,0.823236899034275,0.330418782983798,0.264450566663544,1.06644125267617,0.232236671860439,2.06187938115349,0.80673409849337,0.667134131534611,0.570676878337677,1.89811624617805,0.823494773620054,0.754005626400808,2.18852119245266,1.75467678407208,0.898819408654221,1.51296634912286,0.199141273254367,0.189667900953082,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.316182685621286,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0.405720242777006,0,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0.37898282354097,0.977789858652155,0.509235257325564,0,0.335012514883631,0.238043640886014,0.585400943573396,0.315270288212382,0.8858587585951,0.956728611944923,0.983179888294428,2.07221978239075,0.578596234326046,36.1899081454253,22.3001330365671,0.491764273019036,1.65562047782839,1.12385412991454,0.35163505977661,6.55739781506702,1.76729649043061,22.085575359138,21.4741309363151,37.9145180009726,62.1318874676635,72.1867704026957,80.3937347440284,29.9559919239422,35.0707029493574,30.4371589018823,4.81981974632711,2.98074178937364,1.42452482933804,1.46598263418218,2.47455184458803,5.30980553359851,1.94224508923985,0.906970670894253,0.188605079755898,2.36241514304618,1.84461088766356,1.03371317267288,3.99887102425256,5.70395805415554,3.16036757935816,1.05418608574999,2.06271086496374,0.340439605753788,0.36012218806262,0.258717367565509,1.07168517515796,0.709360934569094,1.24858172321449,1.81003922662333,1.8267896946876,6.57080782578389,0.42366414172764,1.10264199027481,2.80306630000516,2.58343082713449,4.22190474497091,1.90995750405018,3.11867709515616,0.874442509889552,1.29797711407357,0,0.412773735926445,0,0,0,0,0,0,0,0,0.949007980743406,1.82987520414164,1.29606408986162,1.04544148007234,1.31017538247707,2.29269388854195,2.81021749466142,2.87931536182433,1.16653475962614,0.621339313086926,5.07323644815771,38.8743019714345,26.9697339445069,28.1954223098869,26.7360834598903,32.6085322197202,27.6963083203979,50.3890969346087,41.0000036704529,14.0118790079084,10.0810502190253,0.316011120628178,0.810900861160657,0.616265742988964,0.25984164595559,0.895133478337407,0,0.240390899039938,0.295379054349154,0.605798699688886,0,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,4.25017106870819,15.9530104133505,0.915758121336325,0.643105137237198,0.501572104035363,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0.415149390336707,0.399024873401031,0.512200817262403,1.21553358534147,1.46729213839588,1.47074806760011,1.55572709461131,2.47242068686673,1.28367683836726,2.52697211763797,1.77435509923168,2.26351609663291,1.12369808963859,1.6646539625266,1.83793500657962,1.90517476513229,1.50649623728312,1.92909220463705,0.824171801606613,2.06078488188156,1.37147700954166,1.06485483695602,1.43061713968393,2.32554266611726,1.03520318456864,2.36920902096694,2.74391959309159,2.10455769150274,1.90125759384206,1.68342681497322,1.77952527186261,2.36410757701352,2.86461730218783,2.01417893541756,1.92906610981141,1.49886346762768,2.8071793013449,1.93383948643468,3.06061331310149,4.19123696327079,3.70988536992674 | |||
|short_description=p5@Gas7 | |||
}} |
Latest revision as of 22:57, 1 October 2015
Short description: | p5@Gas7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gas7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000108682, NM_001109657, uc011xwo.1_5end |
EntrezGene: | Gas7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.50e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.79e-10 | 11 |
gonad | 2.95e-09 | 18 |
gonad primordium | 2.95e-09 | 18 |
external genitalia | 1.30e-08 | 17 |
indifferent external genitalia | 1.30e-08 | 17 |
indifferent gonad | 1.30e-08 | 17 |
autonomic nervous system | 1.50e-08 | 9 |
testis | 3.43e-08 | 14 |
reproductive structure | 8.29e-08 | 26 |
reproductive system | 8.29e-08 | 26 |
body cavity | 1.11e-07 | 37 |
body cavity or lining | 1.11e-07 | 37 |
reproductive organ | 1.76e-07 | 24 |
male reproductive organ | 2.82e-07 | 15 |
body cavity precursor | 3.19e-07 | 38 |
male organism | 3.78e-07 | 16 |
male reproductive system | 3.78e-07 | 16 |
anatomical cavity | 8.60e-07 | 39 |