FFCP PHASE1:Hg19::chr3:113616600..113616617,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54762 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25252 | |||
|TSSclassifier=strong | |||
|UniProt=C9K0V2 | |||
|association_with_transcript=261bp_to_ENST00000488680_5end | |||
|cluster_id=chr3:113616600..113616617,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_GRAMD1C_5end | |||
|id=chr3:113616600..113616617,+ | |||
|ontology_enrichment_celltype=CL:0000313!7.68e-13!1;CL:0000039!1.43e-07!7;CL:0000586!1.43e-07!7;CL:0000159!4.69e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!6.82e-13!1;DOID:1357!6.82e-13!1;DOID:2152!7.68e-13!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.85e-24!2;UBERON:0005418!2.62e-13!1;UBERON:0001389!2.62e-13!1;UBERON:0000026!2.62e-13!1;UBERON:0008784!2.62e-13!1;UBERON:0006058!2.62e-13!1;UBERON:0003663!2.62e-13!1;UBERON:0001383!2.62e-13!1;UBERON:0004256!2.62e-13!1;UBERON:0002529!2.62e-13!1;UBERON:0004708!2.62e-13!1;UBERON:0002101!2.62e-13!1;UBERON:0004709!2.62e-13!1;UBERON:0003661!2.62e-13!1;UBERON:0002471!2.62e-13!1;UBERON:0004357!2.62e-13!1;UBERON:0009872!2.62e-13!1;UBERON:0004347!2.62e-13!1;UBERON:0005420!2.62e-13!1;UBERON:0005732!2.62e-13!1;UBERON:0006057!2.62e-13!1;UBERON:0000978!2.62e-13!1;UBERON:0002103!2.62e-13!1;UBERON:0001665!2.62e-13!1;UBERON:0003823!2.62e-13!1;UBERON:0000154!2.62e-13!1;UBERON:0005733!2.62e-13!1;UBERON:0005730!2.62e-13!1;UBERON:0001764!6.82e-13!1;UBERON:0001825!6.82e-13!1;UBERON:0004911!7.68e-13!1;UBERON:0003296!9.76e-13!4;UBERON:0010133!9.76e-13!4;UBERON:0001894!1.17e-07!7;UBERON:0003124!1.17e-07!7;UBERON:0006222!1.17e-07!7;UBERON:0001630!2.74e-07!2;UBERON:0005090!2.74e-07!2;UBERON:0004909!4.69e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.72e-11;19!UBERON:0006925;1.72e-11;19!UBERON:0002423;5.49e-09;25!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.72e-11,19;UBERON:0006925,1.72e-11,19;UBERON:0008836,1.72e-11,19;UBERON:0008835,4.53e-10,22;UBERON:0003894,4.53e-10,22;UBERON:0009854,1.12e-09,23;UBERON:0007499,5.49e-09,25;UBERON:0009497,5.49e-09,25;UBERON:0000015,5.49e-09,25;UBERON:0002423,5.49e-09,25;UBERON:0006235,5.49e-09,25;UBERON:0004161,5.49e-09,25;UBERON:0009856,1.11e-08,26;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.564214628977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@GRAMD1C | |||
}} |
Latest revision as of 16:25, 19 September 2015
Short description: | p5@GRAMD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRAMD1C_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 261bp_to_ENST00000488680_5end |
EntrezGene: | GRAMD1C |
HGNC: | 25252 |
UniProt: | C9K0V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.72e-11 | 19 |
digestive gland | 1.72e-11 | 19 |
liver bud | 1.72e-11 | 19 |
hepatic diverticulum | 4.53e-10 | 22 |
liver primordium | 4.53e-10 | 22 |
digestive tract diverticulum | 1.12e-09 | 23 |
epithelial sac | 5.49e-09 | 25 |
epithelium of foregut-midgut junction | 5.49e-09 | 25 |
anatomical boundary | 5.49e-09 | 25 |
hepatobiliary system | 5.49e-09 | 25 |
foregut-midgut junction | 5.49e-09 | 25 |
septum transversum | 5.49e-09 | 25 |
sac | 1.11e-08 | 26 |
exocrine gland | 1.92e-07 | 31 |
exocrine system | 1.92e-07 | 31 |