FFCP PHASE1:Hg19::chr3:128202340..128202366,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:128202340..128202366,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr3:128202340..128202366,+ | |||
|id=chr3:128202340..128202366,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.31e-44!5;CL:0000457!1.31e-44!5;CL:0002191!1.31e-44!5;CL:0000097!1.31e-44!5;CL:0000831!1.31e-44!5;CL:0002028!1.31e-44!5;CL:0000071!5.09e-30!18;CL:0002546!5.09e-30!18;CL:0002618!3.81e-26!3;CL:0000163!8.69e-25!9;CL:0002543!2.64e-23!6;CL:0002139!2.79e-22!24;CL:0000115!5.70e-15!35;CL:0002078!1.06e-11!44;CL:1000413!2.16e-09!9;CL:0000213!8.48e-09!57;CL:0000215!8.48e-09!57;CL:0000076!5.27e-08!62;CL:0002544!8.89e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.72e-89;5!CL:0000163;6.09e-50;9!CL:0000151;2.52e-13;36!CL:0002543;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.98e-89,5;CL:0002028,8.98e-89,5;CL:0000163,6.62e-50,9;CL:0000151,2.78e-13,36;CL:0002543,1.44e-09,6;CL:0000839,1.53e-07,66;CL:0000557,1.92e-07,67;CL:0000766,5.48e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.09e-30!18;UBERON:0004638!5.09e-30!18;UBERON:0004852!5.09e-30!18;UBERON:0000487!2.15e-24!22;UBERON:0006914!2.37e-21!25;UBERON:0002066!5.94e-16!5;UBERON:0001638!1.25e-15!9;UBERON:0003920!1.25e-15!9;UBERON:0004582!1.25e-15!9;UBERON:0003915!2.16e-09!9;UBERON:0004700!2.16e-09!9;UBERON:0001917!2.16e-09!9;UBERON:0001981!2.63e-08!60;UBERON:0007500!2.63e-08!60;UBERON:0004537!2.63e-08!60;UBERON:0006965!2.63e-08!60;UBERON:0000055!4.35e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;8.61e-07;9!UBERON:0003920;8.61e-07;9!UBERON:0004582;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,8.37e-07,9;UBERON:0003920,8.37e-07,9;UBERON:0004582,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.550236083880135,0,0,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,7.46381215946779,1.29707958075265,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:128202340..128202366,+ | |||
}} |
Latest revision as of 15:31, 29 July 2015
Short description: | p@chr3:128202340..128202366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:128202340..128202366, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.98e-89 | 5 |
basophil mast progenitor cell | 8.98e-89 | 5 |
endocrine cell | 6.62e-50 | 9 |
secretory cell | 2.78e-13 | 36 |
vein endothelial cell | 1.44e-09 | 6 |
myeloid lineage restricted progenitor cell | 1.53e-07 | 66 |
granulocyte monocyte progenitor cell | 1.92e-07 | 67 |
myeloid leukocyte | 5.48e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
vein | 8.37e-07 | 9 |
venous blood vessel | 8.37e-07 | 9 |
venous system | 8.37e-07 | 9 |