FFCP PHASE1:Mm9::chr12:74880706..74880713,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:74880706..74880713,-|id=chr12:74880706..74880713,-|ontology_enrichment_celltype=CL:0002250!1.17e-07!3|ontology_enrichment_celltype_v019_2=CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000215,3.18e-07,3;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!3.66e-07!23;UBERON:0001009!3.66e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0.7813353445238,0,1.17646297606203,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,11.8844440367688,3.44169550792555,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,2.1066395619397,0.51469581422943,0.568326998791185,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.820837320395476,0.162137619091711,3.36259971078264,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0.231867835620421|short_description=p@chr12:74880706..74880713,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:74880706..74880713,- | |||
|description=CAGE_peak_at_chr12:74880706..74880713,- | |||
|id=chr12:74880706..74880713,- | |||
|ontology_enrichment_celltype=CL:0002250!1.17e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000215,3.18e-07,3;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.66e-07!23;UBERON:0001009!3.66e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0.7813353445238,0,1.17646297606203,0.683045484958446,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,11.8844440367688,3.44169550792555,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,2.1066395619397,0.51469581422943,0.568326998791185,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.820837320395476,0.162137619091711,3.36259971078264,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr12:74880706..74880713,- | |||
}} |
Latest revision as of 05:37, 5 August 2015
Short description: | p@chr12:74880706..74880713, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:74880706..74880713, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
fibroblast | 7.74e-19 | 1 |
hepatic stellate cell | 7.74e-19 | 1 |
barrier cell | 3.18e-07 | 3 |
secretory cell | 3.64e-07 | 3 |
stromal cell | 3.64e-07 | 3 |
extracellular matrix secreting cell | 3.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.15e-19 | 1 |
hepatic sinusoid | 5.15e-19 | 1 |
parenchyma | 5.15e-19 | 1 |
abdomen blood vessel | 5.15e-19 | 1 |
sinusoid | 5.15e-19 | 1 |
digestive system duct | 5.15e-19 | 1 |
abdominal segment blood vessel | 5.15e-19 | 1 |
trunk blood vessel | 5.15e-19 | 1 |
liver parenchyma | 5.15e-19 | 1 |
liver lobule | 5.15e-19 | 1 |
biliary system | 5.15e-19 | 1 |
biliary tree | 5.15e-19 | 1 |
biliary bud | 5.15e-19 | 1 |
hepatic duct | 5.15e-19 | 1 |