FFCP PHASE1:Hg19::chr3:34262215..34262222,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:34262215..34262222,+ | |||
|coexpression_cluster_id=C1515 | |||
|description=CAGE_peak_at_chr3:34262215..34262222,+ | |||
|id=chr3:34262215..34262222,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.59e-15!24;CL:0000064!3.87e-15!3;CL:0005012!3.87e-15!3;CL:0000067!3.87e-15!3;CL:0002304!3.87e-15!3;CL:0005020!9.06e-14!6;CL:0002138!9.06e-14!6;CL:0005022!9.06e-14!6;CL:1000507!1.95e-10!12;CL:1000494!1.95e-10!12;CL:0000115!6.68e-10!35;CL:0002078!2.07e-09!44;CL:0002544!5.12e-08!6;CL:1000449!9.57e-08!16;CL:0002618!3.02e-07!3;CL:1000497!7.57e-07!18;CL:0002518!7.57e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.22e-59;6!CL:0002139;6.13e-27;24!CL:0002545;6.30e-21;2!CL:0000115;1.46e-16;36!CL:0002078;1.91e-12;45!CL:0000213;9.45e-11;58!CL:0000215;9.45e-11;58!CL:0002544;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,9.96e-60,6;CL:0002138,9.96e-60,6;CL:0005022,9.96e-60,6;CL:0002139,5.93e-27,24;CL:0002545,6.96e-21,2;CL:0000115,3.00e-18,36;CL:0002078,9.38e-15,45;CL:0000213,1.31e-11,58;CL:0000215,1.31e-11,58;CL:0002544,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.22e-59;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.19e-19!4;UBERON:0001778!3.87e-15!3;UBERON:0001775!3.87e-15!3;UBERON:0002049!5.96e-14!79;UBERON:0007798!5.96e-14!79;UBERON:0002203!5.61e-13!6;UBERON:0001768!5.61e-13!6;UBERON:0007625!8.23e-11!11;UBERON:0009773!1.95e-10!12;UBERON:0001231!1.95e-10!12;UBERON:0004810!1.95e-10!12;UBERON:0001473!2.41e-10!8;UBERON:0004536!2.41e-10!8;UBERON:0006558!2.41e-10!8;UBERON:0000055!2.90e-09!69;UBERON:0004535!5.73e-09!110;UBERON:0001009!1.24e-08!113;UBERON:0001801!1.95e-08!14;UBERON:0002465!2.78e-08!10;UBERON:0002113!4.13e-08!27;UBERON:0003918!4.13e-08!27;UBERON:0005095!4.13e-08!27;UBERON:0007687!4.13e-08!27;UBERON:0000947!6.92e-08!21;UBERON:0010191!6.92e-08!21;UBERON:0004211!9.57e-08!16;UBERON:0001285!9.57e-08!16;UBERON:0007684!9.57e-08!16;UBERON:0003220!9.57e-08!16;UBERON:0004208!9.57e-08!16;UBERON:0006555!2.86e-07!17;UBERON:0005103!2.86e-07!17;UBERON:0000083!2.86e-07!17;UBERON:0009201!2.86e-07!17;UBERON:0004819!2.86e-07!17;UBERON:0006553!2.86e-07!17;UBERON:0003074!2.86e-07!17;UBERON:0003060!2.86e-07!17;UBERON:0002200!4.07e-07!11;UBERON:0006876!4.07e-07!11;UBERON:0000080!7.57e-07!18;UBERON:0002120!7.57e-07!18;UBERON:0004875!7.57e-07!18;UBERON:0005721!7.57e-07!18;UBERON:0005754!7.57e-07!18;UBERON:0007297!7.57e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;5.04e-45;8!UBERON:0004536;5.04e-45;8!UBERON:0006558;5.04e-45;8!UBERON:0002465;3.05e-36;10!UBERON:0005800;6.30e-21;2!UBERON:0001515;6.30e-21;2!UBERON:0002405;4.96e-14;27!UBERON:0002118;2.86e-09;5!UBERON:0002049;6.28e-08;75!UBERON:0007798;6.28e-08;75!UBERON:0000055;1.91e-07;65!UBERON:0002193;3.44e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.34e-45,8;UBERON:0004536,4.34e-45,8;UBERON:0006558,4.34e-45,8;UBERON:0002465,2.70e-36,10;UBERON:0005800,6.96e-21,2;UBERON:0001515,6.96e-21,2;UBERON:0000055,5.34e-10,68;UBERON:0002118,2.97e-09,5;UBERON:0002049,8.48e-09,78;UBERON:0007798,8.48e-09,78 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,1.55050055501597,2.49036383880697,7.02913286805807,0,0,0,1.10298924103761,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.770153371044148,0.784349769176855,0,0.844413031143006,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,2.3885753321917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:34262215..34262222,+ | |||
}} |
Latest revision as of 20:34, 29 July 2015
Short description: | p@chr3:34262215..34262222, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:34262215..34262222, + |
Coexpression cluster: | C1515_Endothelial_schwannoma_Renal_cerebellum_lung_heart_diaphragm |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 9.96e-60 | 6 |
endothelial cell of lymphatic vessel | 9.96e-60 | 6 |
vascular lymphangioblast | 9.96e-60 | 6 |
endothelial cell of vascular tree | 5.93e-27 | 24 |
thoracic aorta endothelial cell | 6.96e-21 | 2 |
endothelial cell | 3.00e-18 | 36 |
meso-epithelial cell | 9.38e-15 | 45 |
lining cell | 1.31e-11 | 58 |
barrier cell | 1.31e-11 | 58 |
aortic endothelial cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.34e-45 | 8 |
lymph vasculature | 4.34e-45 | 8 |
lymphatic part of lymphoid system | 4.34e-45 | 8 |
lymphoid system | 2.70e-36 | 10 |
segment of aorta | 6.96e-21 | 2 |
thoracic aorta | 6.96e-21 | 2 |
vessel | 5.34e-10 | 68 |
right ovary | 2.97e-09 | 5 |
vasculature | 8.48e-09 | 78 |
vascular system | 8.48e-09 | 78 |