FFCP PHASE1:Hg19::chr3:46205262..46205283,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1604 | |||
|TSSclassifier=strong | |||
|UniProt=P51677 | |||
|association_with_transcript=166bp_to_ENST00000357422,uc003cpg.1_5end | |||
|cluster_id=chr3:46205262..46205283,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_5_at_CCR3_5end | |||
|id=chr3:46205262..46205283,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-18!254;CL:0002076!5.04e-14!43;CL:0000223!5.87e-13!59;CL:0002251!8.09e-10!21;CL:0000039!3.84e-09!7;CL:0000586!3.84e-09!7;CL:0002541!3.92e-09!3;CL:0002621!2.45e-08!3;CL:0000082!1.30e-07!19;CL:0002150!2.22e-07!3;CL:0000861!2.22e-07!3;CL:0000159!6.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000159;3.14e-28;2!CL:0002541;1.55e-18;3!CL:0000319;4.72e-15;1!CL:0000313;5.42e-15;1!CL:0002537;1.35e-11;5!CL:0000349;1.99e-11;19!CL:1000415;4.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,3.14e-28,2;CL:0002541,2.32e-18,3;CL:0000319,4.73e-15,1;CL:0000313,5.42e-15,1;CL:0002537,1.35e-11,5;CL:0000349,2.25e-11,19;CL:1000415,4.09e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-14;1 | |||
|ontology_enrichment_disease=DOID:305!3.20e-25!106;DOID:0050687!9.45e-21!143;DOID:1749!1.87e-12!14;DOID:162!7.56e-12!235;DOID:14566!2.33e-11!239;DOID:0050615!4.48e-09!16;DOID:299!1.31e-08!25;DOID:1324!1.13e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3030;4.72e-15;1!DOID:2152;5.42e-15;1!DOID:299;7.37e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.73e-15,1;DOID:2152,5.42e-15,1;DOID:299,7.00e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.22e-17!14;UBERON:0000158!2.22e-17!14;UBERON:0005911!1.13e-13!82;UBERON:0003124!3.36e-13!7;UBERON:0004119!1.10e-12!169;UBERON:0000925!1.10e-12!169;UBERON:0006595!1.10e-12!169;UBERON:0000478!2.76e-11!24;UBERON:0001007!3.15e-10!155;UBERON:0001555!3.15e-10!155;UBERON:0007026!3.15e-10!155;UBERON:0005153!4.50e-10!37;UBERON:0002294!3.58e-09!7;UBERON:0001173!3.58e-09!7;UBERON:0004912!3.58e-09!7;UBERON:0000476!3.92e-09!3;UBERON:0000920!3.92e-09!3;UBERON:0004807!5.73e-09!28;UBERON:0001949!2.45e-08!3;UBERON:0002048!5.78e-08!22;UBERON:0000117!5.78e-08!22;UBERON:0000171!5.78e-08!22;UBERON:0000170!5.78e-08!22;UBERON:0005597!5.78e-08!22;UBERON:0000118!5.78e-08!22;UBERON:0003929!7.57e-08!54;UBERON:0000077!8.80e-08!130;UBERON:0004923!1.14e-07!57;UBERON:0004802!1.30e-07!19;UBERON:0000115!1.30e-07!19;UBERON:0001004!1.31e-07!72;UBERON:0000344!7.66e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.01e-21;10!UBERON:0000158;2.01e-21;10!UBERON:0003124;1.55e-18;3!UBERON:0000920;1.55e-18;3!UBERON:0004911;5.42e-15;1!UBERON:0000478;8.69e-14;24!UBERON:0000305;1.53e-08;7!UBERON:0004909;3.82e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.32e-18,3;UBERON:0005631,2.49e-15,14;UBERON:0000158,2.49e-15,14;UBERON:0004911,5.42e-15,1;UBERON:0000478,9.81e-14,24;UBERON:0000305,1.53e-08,7;UBERON:0003124,2.07e-08,7;UBERON:0004909,3.82e-08,2;UBERON:0004871,1.40e-07,8;UBERON:0004923,7.16e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0.671928512795438,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,0,1.53580351049616,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.508507300585533,2.83665218121524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,0.179515288819544,1.95565269459615,0.957003479195758,2.01514705484097,1.06606955203727,0,0,0,0,0,0,0,0,0,0.489698424477443,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0.164230914106418,0,0,0,0.137041924646751,0,0,3.32437350649165,0.240476460754601,0,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.537862017998534,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0259641639471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15924980702256,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0.523813388962845,0,0.591424344868181,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0,0,0,0.111231401892069,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,6.48761504427195,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0,0.61193297845189,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.190941474834495,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p5@CCR3 | |||
}} |
Latest revision as of 10:15, 18 September 2015
Short description: | p5@CCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCR3_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 166bp_to_ENST00000357422, uc003cpg.1_5end |
EntrezGene: | CCR3 |
HGNC: | 1604 |
UniProt: | P51677 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 3.14e-28 | 2 |
chorionic membrane mesenchymal stem cell | 2.32e-18 | 3 |
mucus secreting cell | 4.73e-15 | 1 |
serous secreting cell | 5.42e-15 | 1 |
amnion mesenchymal stem cell | 1.35e-11 | 5 |
extraembryonic cell | 2.25e-11 | 19 |
epithelial cell of gall bladder | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.32e-18 | 3 |
extraembryonic membrane | 2.49e-15 | 14 |
membranous layer | 2.49e-15 | 14 |
epithelium of female gonad | 5.42e-15 | 1 |
extraembryonic structure | 9.81e-14 | 24 |
amnion | 1.53e-08 | 7 |
chorion | 2.07e-08 | 7 |
epithelium of gonad | 3.82e-08 | 2 |
somatic layer of lateral plate mesoderm | 1.40e-07 | 8 |
organ component layer | 7.16e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.73e-15 | 1 |
ovary epithelial cancer | 5.42e-15 | 1 |
adenocarcinoma | 7.00e-09 | 25 |