FFCP PHASE1:Hg19::chr3:53528106..53528124,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:53528106..53528124,+ | |||
|description=CAGE_peak_at_chr3:53528106..53528124,+ | |||
|id=chr3:53528106..53528124,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;9.46e-10;2!CL:0000047;1.51e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,8.69e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.51e-09;2!UBERON:0003056;8.86e-07;3!UBERON:0009847;8.86e-07;3!UBERON:0003353;8.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.52e-17!115;UBERON:0001049!1.09e-12!57;UBERON:0005068!1.09e-12!57;UBERON:0006241!1.09e-12!57;UBERON:0007135!1.09e-12!57;UBERON:0003075!1.25e-10!86;UBERON:0007284!1.25e-10!86;UBERON:0005743!1.30e-10!86;UBERON:0000073!4.81e-10!94;UBERON:0001016!4.81e-10!94;UBERON:0002346!6.80e-10!90;UBERON:0002616!1.75e-09!59;UBERON:0001017!3.76e-09!82;UBERON:0002780!4.28e-09!41;UBERON:0001890!4.28e-09!41;UBERON:0006240!4.28e-09!41;UBERON:0003056!4.53e-09!61;UBERON:0006947!5.38e-09!3;UBERON:0004054!5.38e-09!3;UBERON:0003080!8.35e-09!42;UBERON:0002791!1.01e-08!33;UBERON:0004907!1.02e-08!5;UBERON:0001893!2.15e-08!34;UBERON:0000955!2.62e-08!69;UBERON:0006238!2.62e-08!69;UBERON:0001869!1.03e-07!32;UBERON:0001950!1.34e-07!20;UBERON:0000956!2.82e-07!25;UBERON:0000203!2.82e-07!25;UBERON:0002020!3.92e-07!34;UBERON:0003528!3.92e-07!34;UBERON:0005904!8.15e-07!4;UBERON:0002619!8.47e-07!22;UBERON:0000481!9.15e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;9.48e-18;1!UBERON:0001301;9.48e-18;1!UBERON:0004175;6.44e-13;21!UBERON:0000002;4.68e-12;6!UBERON:0001560;4.68e-12;6!UBERON:0001905;9.46e-10;2!UBERON:0002757;9.46e-10;2!UBERON:0010134;9.46e-10;2!UBERON:0005408;9.46e-10;2!UBERON:0001899;9.46e-10;2!UBERON:0000995;2.16e-09;17!UBERON:0003975;6.68e-09;18!UBERON:0002106;8.86e-07;3!UBERON:0001896;8.86e-07;3!UBERON:0006947;8.86e-07;3!UBERON:0005290;8.86e-07;3!UBERON:0004054;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,6.23e-18,1;UBERON:0006834,1.70e-17,1;UBERON:0000002,3.85e-12,6;UBERON:0001560,3.85e-12,6;UBERON:0004175,6.25e-11,25;UBERON:0001905,1.03e-09,2;UBERON:0002757,1.03e-09,2;UBERON:0010134,1.03e-09,2;UBERON:0005408,1.03e-09,2;UBERON:0001899,1.03e-09,2;UBERON:0000995,1.04e-07,21;UBERON:0005795,2.21e-07,22;UBERON:0003975,2.21e-07,22;UBERON:0005156,4.79e-07,59;UBERON:0000990,4.79e-07,59;UBERON:0006947,7.70e-07,3;UBERON:0004054,7.70e-07,3;UBERON:0002106,9.64e-07,3;UBERON:0004854,9.64e-07,3;UBERON:0009034,9.64e-07,3;UBERON:0002095,9.64e-07,3;UBERON:0004782,9.64e-07,3;UBERON:0003281,9.64e-07,3;UBERON:0009664,9.64e-07,3;UBERON:0002296,9.64e-07,3;UBERON:0005602,9.64e-07,3;UBERON:0001179,9.64e-07,3;UBERON:0006293,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.61221999997337,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0,0,0.110579259931225,0,0,1.96089234334182,0,2.30850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,2.81305231664718,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.242998226632099,0,0.551639951094387,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0.533937062838473,5.97376359378731,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0,0,0,0,0,0,0,0,0.126831620387814,0.546974809018219,0,0,0,0,2.14280734351315,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,1.41287567130925,0,0,0.913158720509496,0,0,1.42953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0.397901550322736,0.118920090777569,0,0,0.301925687133347,0,0.437119121007915,0,0,0.235676547101626,0.196308467114945,0,0.4226557275834,0,0,1.22469987149797,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0.12729431655633,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,1.1001729976458,0.813792356631477,0,0,0 | |||
|short_description=p@chr3:53528106..53528124,+ | |||
}} | |||
Latest revision as of 22:36, 29 July 2015
| Short description: | p@chr3:53528106..53528124, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:53528106..53528124, + |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of large intestine | 8.69e-10 | 2 |
| Ontology term | p-value | n |
|---|---|---|
| epididymis | 6.23e-18 | 1 |
| uterus or analog | 1.70e-17 | 1 |
| uterine cervix | 3.85e-12 | 6 |
| neck of organ | 3.85e-12 | 6 |
| internal genitalia | 6.25e-11 | 25 |
| pineal body | 1.03e-09 | 2 |
| regional part of epithalamus | 1.03e-09 | 2 |
| secretory circumventricular organ | 1.03e-09 | 2 |
| circumventricular organ | 1.03e-09 | 2 |
| epithalamus | 1.03e-09 | 2 |
| uterus | 1.04e-07 | 21 |
| embryonic uterus | 2.21e-07 | 22 |
| internal female genitalia | 2.21e-07 | 22 |
| reproductive structure | 4.79e-07 | 59 |
| reproductive system | 4.79e-07 | 59 |
| male genital duct | 7.70e-07 | 3 |
| internal male genitalia | 7.70e-07 | 3 |
| spleen | 9.64e-07 | 3 |
| gastrointestinal system mesentery | 9.64e-07 | 3 |
| stomach region | 9.64e-07 | 3 |
| mesentery | 9.64e-07 | 3 |
| gastrointestinal system serosa | 9.64e-07 | 3 |
| mesentery of stomach | 9.64e-07 | 3 |
| gut mesentery | 9.64e-07 | 3 |
| dorsal mesentery | 9.64e-07 | 3 |
| dorsal mesogastrium | 9.64e-07 | 3 |
| peritoneal cavity | 9.64e-07 | 3 |
| spleen primordium | 9.64e-07 | 3 |