FFCP PHASE1:Mm9::chr14:17408022..17408043,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=218772|HGNC=|UniProt=P22605|association_with_transcript=-36bp_to_ENSMUST00000063750_5end|description=CAGE_peak_6_at_Rarb_5end|id=chr14:17408022..17408043,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.00e-08!18;UBERON:0000948!6.00e-08!18;UBERON:0005498!6.00e-08!18;UBERON:0004140!6.00e-08!18;UBERON:0009881!6.00e-08!18;UBERON:0004141!6.00e-08!18;UBERON:0003084!6.00e-08!18;UBERON:0007005!6.00e-08!18;UBERON:0004139!6.00e-08!18;UBERON:0004291!6.00e-08!18;UBERON:0003103!1.16e-07!43;UBERON:0004111!1.45e-07!122;UBERON:0000025!2.70e-07!114;UBERON:0004535!5.24e-07!23;UBERON:0001009!5.24e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.97e-15,23;UBERON:0001009,2.97e-15,23;UBERON:0007100,5.76e-13,18;UBERON:0000948,5.76e-13,18;UBERON:0005498,5.76e-13,18;UBERON:0004140,5.76e-13,18;UBERON:0009881,5.76e-13,18;UBERON:0004141,5.76e-13,18;UBERON:0003084,5.76e-13,18;UBERON:0007005,5.76e-13,18;UBERON:0004139,5.76e-13,18;UBERON:0004291,5.76e-13,18;UBERON:0003914,1.96e-11,47;UBERON:0004872,4.09e-10,33;UBERON:0003103,2.37e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0,0.420649922702764,0,0,0,0,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,0,0.142371680799103,0.186399445825301,0.151452386666368,0.302286240427142,2.02905142091174,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,1.51657333504435,0.22836775943812,0.517875767294343,0,0,0,0.461230994512117,0,0,0.502666365318702,0,1.01219549843938,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0.585561594023094,0.41889341362691,0,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.150704817835715,0.476255494059295,0.2562274405697,0.374806898238915,1.55222022443409,0,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,1.40715635988658,0.36012412292203,0.473489471170421,0.590292695242212,0.925602677324269,0.697601834251224,2.41446061259657,0.467061369468678,1.15191894939436,2.29834449710733,2.1888578577381,4.09359964790931,2.85415149878366,2.14730270016595,0.841159794256509,0.102904612379284,0.330418782983798,0.264450566663544,0.853153002140936,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.342745537829186,0,1.01825663922657,0.775809948670503,0.280543279561274,0.948548056863859,0.295220295959204,0.941992367048249,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.549122826376163,1.43768206527355,0,1.24815069245824,0.505157755894224,0.538192240565737,1.4473305640901,0,0.189491411770485,0.651859905768103,0.678980343100753,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.80275294993896,0.234423373184406,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.716906393857656,0.222798674082394,0.849229592366497,0,0.292255857911312,0,2.24924921495265,0.141940085208269,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,1.28602221018955,1.06404140185364,0.713475270408282,0.987294123612726,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0.180938774784468,0,0,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.965947970160952,0.187682475451182,0.549454872801795,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,2.2516060161211,0,1.03552062350364,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0,0,0.561849044819294,0.384150914429216,0.574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.761531471025089,0.365855945745545,0.789209134313529,0.679020569229309,1.12228454331548,0.355905054372522,0.29551344712669,0,0.77468420592983,0.578719832943424,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0|short_description=p6@Rarb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218772 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P22605 | |||
|association_with_transcript=-36bp_to_ENSMUST00000063750_5end | |||
|cluster_id=chr14:17408022..17408043,- | |||
|description=CAGE_peak_6_at_Rarb_5end | |||
|id=chr14:17408022..17408043,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.00e-08!18;UBERON:0000948!6.00e-08!18;UBERON:0005498!6.00e-08!18;UBERON:0004140!6.00e-08!18;UBERON:0009881!6.00e-08!18;UBERON:0004141!6.00e-08!18;UBERON:0003084!6.00e-08!18;UBERON:0007005!6.00e-08!18;UBERON:0004139!6.00e-08!18;UBERON:0004291!6.00e-08!18;UBERON:0003103!1.16e-07!43;UBERON:0004111!1.45e-07!122;UBERON:0000025!2.70e-07!114;UBERON:0004535!5.24e-07!23;UBERON:0001009!5.24e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.97e-15,23;UBERON:0001009,2.97e-15,23;UBERON:0007100,5.76e-13,18;UBERON:0000948,5.76e-13,18;UBERON:0005498,5.76e-13,18;UBERON:0004140,5.76e-13,18;UBERON:0009881,5.76e-13,18;UBERON:0004141,5.76e-13,18;UBERON:0003084,5.76e-13,18;UBERON:0007005,5.76e-13,18;UBERON:0004139,5.76e-13,18;UBERON:0004291,5.76e-13,18;UBERON:0003914,1.96e-11,47;UBERON:0004872,4.09e-10,33;UBERON:0003103,2.37e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0,0.420649922702764,0,0,0,0,0,1.10115880999389,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.916789486660861,0,0.142371680799103,0.186399445825301,0.151452386666368,0.302286240427142,2.02905142091174,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,1.51657333504435,0.22836775943812,0.517875767294343,0,0,0,0.461230994512117,0,0,0.502666365318702,0,1.01219549843938,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0.585561594023094,0.41889341362691,0,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.150704817835715,0.476255494059295,0.2562274405697,0.374806898238915,1.55222022443409,0,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,1.40715635988658,0.36012412292203,0.473489471170421,0.590292695242212,0.925602677324269,0.697601834251224,2.41446061259657,0.467061369468678,1.15191894939436,2.29834449710733,2.1888578577381,4.09359964790931,2.85415149878366,2.14730270016595,0.841159794256509,0.102904612379284,0.330418782983798,0.264450566663544,0.853153002140936,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.342745537829186,0,1.01825663922657,0.775809948670503,0.280543279561274,0.948548056863859,0.295220295959204,0.941992367048249,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.549122826376163,1.43768206527355,0,1.24815069245824,0.505157755894224,0.538192240565737,1.4473305640901,0,0.189491411770485,0.651859905768103,0.678980343100753,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.80275294993896,0.234423373184406,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.716906393857656,0.222798674082394,0.849229592366497,0,0.292255857911312,0,2.24924921495265,0.141940085208269,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,1.28602221018955,1.06404140185364,0.713475270408282,0.987294123612726,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0.180938774784468,0,0,0,0.927126510052548,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.965947970160952,0.187682475451182,0.549454872801795,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,2.2516060161211,0,1.03552062350364,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0,0,0.561849044819294,0.384150914429216,0.574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.761531471025089,0.365855945745545,0.789209134313529,0.679020569229309,1.12228454331548,0.355905054372522,0.29551344712669,0,0.77468420592983,0.578719832943424,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0 | |||
|short_description=p6@Rarb | |||
}} |
Latest revision as of 18:04, 25 September 2015
Short description: | p6@Rarb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rarb_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENSMUST00000063750_5end |
EntrezGene: | Rarb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.97e-15 | 23 |
circulatory system | 2.97e-15 | 23 |
primary circulatory organ | 5.76e-13 | 18 |
heart | 5.76e-13 | 18 |
primitive heart tube | 5.76e-13 | 18 |
primary heart field | 5.76e-13 | 18 |
anterior lateral plate mesoderm | 5.76e-13 | 18 |
heart tube | 5.76e-13 | 18 |
heart primordium | 5.76e-13 | 18 |
cardiac mesoderm | 5.76e-13 | 18 |
cardiogenic plate | 5.76e-13 | 18 |
heart rudiment | 5.76e-13 | 18 |
epithelial tube | 1.96e-11 | 47 |
splanchnic layer of lateral plate mesoderm | 4.09e-10 | 33 |
compound organ | 2.37e-07 | 43 |