FFCP PHASE1:Mm9::chr15:76730392..76730403,+: Difference between revisions
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{{FFCP|EntrezGene=66398|HGNC=|UniProt=Q8R395|association_with_transcript=4bp_to_ENSMUST00000109793_5end|description=CAGE_peak_2_at_Commd5_5end|id=chr15:76730392..76730403,+|ontology_enrichment_celltype=CL:0000548!2.49e-19!115;CL:0000004!2.49e-19!115;CL:0000255!2.49e-19!115;CL:0002371!5.51e-18!118;CL:0002321!1.36e-17!70;CL:0000220!1.36e-17!70;CL:0000055!5.82e-17!50;CL:0000144!2.07e-16!121;CL:0000012!2.07e-16!121;CL:0002319!2.54e-13!43;CL:0000221!1.19e-12!44;CL:0000133!1.19e-12!44;CL:0000393!6.92e-12!39;CL:0000211!6.92e-12!39;CL:0000723!8.87e-11!91;CL:0000048!8.87e-11!91;CL:0000034!8.87e-10!97;CL:0000540!7.35e-09!33;CL:0000047!7.35e-09!33;CL:0000031!7.35e-09!33;CL:0000404!7.35e-09!33|ontology_enrichment_celltype_v019_2=CL:0002321,1.33e-25,70;CL:0000723,6.56e-18,91;CL:0000048,6.56e-18,91;CL:0000034,3.50e-17,97;CL:0002319,4.20e-17,43;CL:0000221,1.94e-16,44;CL:0000133,1.94e-16,44;CL:0000393,4.22e-16,39;CL:0000211,4.22e-16,39;CL:0000540,1.49e-11,33;CL:0000047,1.49e-11,33;CL:0000031,1.49e-11,33;CL:0000404,1.49e-11,33;CL:0002453,3.62e-09,8;CL:0000219,6.78e-09,54;CL:0000117,5.31e-08,23;CL:0000337,5.31e-08,23;CL:0000128,1.14e-07,6;CL:0000126,1.14e-07,6;CL:0000127,1.14e-07,6;CL:0000473,5.47e-07,7;CL:0000333,8.38e-07,10;CL:0000095,8.38e-07,10;CL:0000243,8.38e-07,10;CL:0000123,8.38e-07,10;CL:0000125,8.38e-07,10;CL:0000030,8.38e-07,10;CL:0000339,8.38e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.51e-07,73|phase1_expression=0.960893082628764,3.14077866875425,3.63999391511629,1.81478526784098,3.50627010962443,3.18970616632591,2.10251376535973,1.42035655785734,0.703943610758334,1.17032263160997,0.34243593645101,1.99430397488341,0.171200729931206,1.48614684112296,0,0.202475267389826,1.39912375625629,0.946386496074713,0.137114433605739,0,2.21112554392781,0.695036658406197,1.82839852397255,4.15980299262857,6.42345986988076,4.59385571292016,4.30761996159075,3.66301095566011,3.80046838912748,2.52030129759931,3.76941868114018,5.08024538767705,3.69038872550742,0,0.577703239502549,0.332469290716985,0.204169356262369,0.837063261473815,0,0,0.588231488031014,0,0,4.40638862914521,3.4468156614635,5.50640256485045,9.38869613217647,7.84890562969608,4.83309602015838,6.9994763666742,3.77963338388479,7.18762821824858,0.335565212115473,0.725362142011344,0,3.08711323243136,3.15186783932632,2.57836046138721,1.21389876515759,2.64495489636016,1.90149421051854,1.35537812827653,3.55717918444456,1.3498495759221,1.97773272513395,2.8419204597844,2.99600110518405,3.45796474789399,1.24427534770173,1.62007125998029,1.89292465216244,0.571301968807607,2.65042249141936,1.22490799214954,1.24599112323707,0,3.30347642998166,2.42605942361857,1.22885226604995,2.1101806036831,2.37867873366265,2.6045668527838,1.95428099300967,0.56276261003168,2.13917546887534,2.94628585473668,0.711858403995515,1.67759501242771,0.832988126665025,0.604572480854284,0.289864488701678,1.72084775396277,4.0798280022465,7.55584468292944,3.24888208723835,1.34408066129201,3.37066608316204,3.40860645156115,3.63700406444016,5.3000936176551,0.281686839553361,2.56652954828636,0,0,0.649473123033642,1.26679932737549,1.01104889002957,3.53970027129086,0.258937883647172,0.742210695324124,0.693941307064543,0,1.38369298353635,0.150722640552623,0.587943535678524,0.502666365318702,0.494389935468748,0.289198713839823,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0.83778682725382,0,0.239630249011841,0,0.254140454146129,0.449371918214468,0.915001205637253,0.251308704225729,0.521472960576829,0,0.41557608911912,0.162241263067758,0.101839363850316,0.497627882440372,0.252722758433675,0.631325567659422,0.910843100738926,0.459804208866946,0.900310649026746,0.30140963567143,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0.431135985865684,0.756424320671277,0.175951124163949,1.09597866213787,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0.772043721344145,0.568326998791185,0.621377317606506,0,0.540186184383045,0.946978942340841,0.787056926989615,0.154267112887378,0,0,0.583826711835847,0.822799249567402,0.164167464079095,0.324275238183423,0.438599962275997,0.439100230582101,0.671032093801859,0,0.205809224758569,0.991256348951394,2.64450566663544,0.639864751605702,0.696710015581316,0.515469845288373,0.605050573870028,0.667134131534611,0.570676878337677,1.42358718463353,0.494096864172033,0.502670417600539,0,0.974820435595601,1.79763881730844,0.432276099749388,0.398282546508734,0.379335801906163,0.456994050438915,0,0.610953983535943,0.969762435838129,0.0701358198903186,0.379419222745544,1.32849133181642,1.09899109488962,0.616985819609003,1.1858105083486,1.16791574001266,1.57247196090562,0.899448449539415,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,0.162135226775035,0.549122826376163,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0.964887042726734,0.369506380333209,0.568474235311454,0.48889492932607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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66398 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8R395 | |||
|association_with_transcript=4bp_to_ENSMUST00000109793_5end | |||
|cluster_id=chr15:76730392..76730403,+ | |||
|description=CAGE_peak_2_at_Commd5_5end | |||
|id=chr15:76730392..76730403,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.49e-19!115;CL:0000004!2.49e-19!115;CL:0000255!2.49e-19!115;CL:0002371!5.51e-18!118;CL:0002321!1.36e-17!70;CL:0000220!1.36e-17!70;CL:0000055!5.82e-17!50;CL:0000144!2.07e-16!121;CL:0000012!2.07e-16!121;CL:0002319!2.54e-13!43;CL:0000221!1.19e-12!44;CL:0000133!1.19e-12!44;CL:0000393!6.92e-12!39;CL:0000211!6.92e-12!39;CL:0000723!8.87e-11!91;CL:0000048!8.87e-11!91;CL:0000034!8.87e-10!97;CL:0000540!7.35e-09!33;CL:0000047!7.35e-09!33;CL:0000031!7.35e-09!33;CL:0000404!7.35e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.33e-25,70;CL:0000723,6.56e-18,91;CL:0000048,6.56e-18,91;CL:0000034,3.50e-17,97;CL:0002319,4.20e-17,43;CL:0000221,1.94e-16,44;CL:0000133,1.94e-16,44;CL:0000393,4.22e-16,39;CL:0000211,4.22e-16,39;CL:0000540,1.49e-11,33;CL:0000047,1.49e-11,33;CL:0000031,1.49e-11,33;CL:0000404,1.49e-11,33;CL:0002453,3.62e-09,8;CL:0000219,6.78e-09,54;CL:0000117,5.31e-08,23;CL:0000337,5.31e-08,23;CL:0000128,1.14e-07,6;CL:0000126,1.14e-07,6;CL:0000127,1.14e-07,6;CL:0000473,5.47e-07,7;CL:0000333,8.38e-07,10;CL:0000095,8.38e-07,10;CL:0000243,8.38e-07,10;CL:0000123,8.38e-07,10;CL:0000125,8.38e-07,10;CL:0000030,8.38e-07,10;CL:0000339,8.38e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.51e-07,73 | |||
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| |||
|short_description=p2@Commd5 | |||
}} |
Latest revision as of 01:10, 27 September 2015
Short description: | p2@Commd5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Commd5_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENSMUST00000109793_5end |
EntrezGene: | Commd5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.33e-25 | 70 |
somatic stem cell | 6.56e-18 | 91 |
multi fate stem cell | 6.56e-18 | 91 |
stem cell | 3.50e-17 | 97 |
neural cell | 4.20e-17 | 43 |
ectodermal cell | 1.94e-16 | 44 |
neurectodermal cell | 1.94e-16 | 44 |
electrically responsive cell | 4.22e-16 | 39 |
electrically active cell | 4.22e-16 | 39 |
neuron | 1.49e-11 | 33 |
neuronal stem cell | 1.49e-11 | 33 |
neuroblast | 1.49e-11 | 33 |
electrically signaling cell | 1.49e-11 | 33 |
oligodendrocyte precursor cell | 3.62e-09 | 8 |
motile cell | 6.78e-09 | 54 |
CNS neuron (sensu Vertebrata) | 5.31e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.31e-08 | 23 |
oligodendrocyte | 1.14e-07 | 6 |
macroglial cell | 1.14e-07 | 6 |
astrocyte | 1.14e-07 | 6 |
defensive cell | 5.47e-07 | 7 |
migratory neural crest cell | 8.38e-07 | 10 |
neuron associated cell | 8.38e-07 | 10 |
glial cell (sensu Vertebrata) | 8.38e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.38e-07 | 10 |
glial cell | 8.38e-07 | 10 |
glioblast | 8.38e-07 | 10 |
glioblast (sensu Vertebrata) | 8.38e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.51e-07 | 73 |