FFCP PHASE1:Hg19::chrX:119694739..119694751,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:119694739..119694751,-
|short_description=p12@CUL4B
|description=CAGE_peak_12_at_CUL4B_5end
|association_with_transcript=65bp_to_NM_001079872,uc004esv.2_5e...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=Q13620 | |UniProt=Q13620 | ||
|association_with_transcript=65bp_to_NM_001079872,uc004esv.2_5end | |||
|cluster_id=chrX:119694739..119694751,- | |||
|coexpression_cluster_id=C964 | |||
|description=CAGE_peak_12_at_CUL4B_5end | |||
|id=chrX:119694739..119694751,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-17!180;CL:0000057!1.40e-12!75;CL:0000222!1.66e-10!119;CL:0002620!7.32e-10!23;CL:0000680!2.34e-07!57;CL:0000056!2.34e-07!57;CL:0000355!2.34e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.44e-12;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.24e-13,76;CL:0002620,4.90e-12,23;CL:0000222,2.08e-10,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.29e-09!110;UBERON:0002049!1.70e-08!79;UBERON:0007798!1.70e-08!79;UBERON:0001009!3.78e-08!113;UBERON:0000055!4.02e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;7.03e-07;5!UBERON:0002216;7.03e-07;5!UBERON:0011134;7.03e-07;5!UBERON:0002209;7.03e-07;5!UBERON:0002213;7.03e-07;5!UBERON:0007844;7.03e-07;5!UBERON:0011138;7.03e-07;5!UBERON:0001130;7.03e-07;5!UBERON:0001066;7.03e-07;5!UBERON:0001468;7.03e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.30e-08,46;UBERON:0002416,7.30e-08,46;UBERON:0002097,3.28e-07,41;UBERON:0011135,7.70e-07,5;UBERON:0002216,7.70e-07,5;UBERON:0011134,7.70e-07,5;UBERON:0002209,7.70e-07,5;UBERON:0002213,7.70e-07,5;UBERON:0005856,7.70e-07,5;UBERON:0005866,7.70e-07,5;UBERON:0005863,7.70e-07,5;UBERON:0007844,7.70e-07,5;UBERON:0011138,7.70e-07,5;UBERON:0001130,7.70e-07,5;UBERON:0001066,7.70e-07,5;UBERON:0001468,7.70e-07,5 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.55049844505568,1.0007329835313,2.23480547213644,0,0,4.42203911398782,2.08948502559871,1.47440361900905,0,0,0,13.9855978844853,12.9244976533887,0,0,0.730310090387373,0,1.10808952269109,1.22400414746552,0.626909442956176,0.286235987131057,0.547497700291537,0.376627918784408,0.229240217243854,0.164201178899891,0.393553906568396,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0,0.852139206383318,0.142169232487422,0.293600439334847,0,0.401088894940283,0,0,0.32389366601898,0,0.290796477559129,0.755751887377619,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0.659702600373432,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,1.63841583378639,0,1.28019066769952,0.800791974072025,1.14950487990897,0,0,0,0,0.764546456250458,0,0,0,1.37696839079683,0.393010762749165,0.411202997999018,1.67186495390678,0.977766799900771,0.473447805734733,1.94826728407911,0.668462741311041,1.17842362989935,1.55073726208535,0.812411591295047,0.768547918354051,0.520237390239513,0.328875809207352,2.48715016007264,1.44901542867526,0.741432815810302,1.33770414044857,0,0.453237370790265,0,1.03088233644789,1.77113784413652,1.59282707162048,0,0,0.602300476311091,0.895906278080929,0,0.710331756132051,0,1.00803371612366,0.534880391567015,0.289648807765598,7.31420598941885,5.36560687762909,0.767175371061182,13.0118094858444,9.02408239144601,5.35932120155048,0,0.486634870302636,0.850813354476611,0.886917589850256,0.87834785693126,0.261958150995425,0,0,0,0,0.398873881556595,0.476981248610684,0,0.371457501329565,0.39752481473341,1.72046919021225,1.04142150482278,2.82653970962005,0.419499436209906,1.37559020970034,1.67195973229448,3.6178346283706,4.26919515224052,2.00832367658802,0,0.760272105718513,0.24406205754817,2.94130464276695,0.81014194788176,2.05389375053383,5.83776368828041,3.71617885594963,1.53316637465883,0.949265659568129,0.549605231791222,0,0,0,0.496971951695318,0.633152558322899,2.1185468930115,0.573673241497627,0.709336764396714,0,0,0.74000264525148,3.11211035399766,1.0776853765575,2.94231425604226,1.36221684880438,1.15235184896,0.468642863667593,3.1216007683032,0.570471821544449,2.54062756938062,0.704606991862589,0.485618833104395,0.702254033511242,3.67477508258808,0.982674538494144,2.37649296704261,3.56400857184616,1.97813543422845,2.73048408581408,0.718618141816238,0.336672227908132,1.12606667884768,1.93944880838928,1.75591048352335,0.612975591598039,2.40380894250555,2.1552114800404,3.7671823494661,7.47450860864986,3.81477422087211,3.60109315301283,7.21367704669072,5.41045134095821,2.97786970130544,3.03797398034279,3.31285817548075,6.31084435610286,5.70709371582256,3.39456719319505,3.90510551768276,2.41805035746337,2.37384829234683,0.193260853163297,0,0.860413786167011,0.731842236777572,0,0.464775771478074,0.518305275076852,1.00928340350251,0.72995471815166,0,0,0,4.64367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.772057809126758,0.217879444092406,0,0.404493924480493,0,0.38474715694639,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0.614942192715568,3.08822058537346,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.695582429850461,2.11335649624479,0.288732895522148,0,0.951270761172991,0,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0.358234090811393,0.581267877027924,0,0,0.616339038092582,0.414656231081544,0.432359860250884,0.50496973370552,0.126995788584338,0.381988425558278,1.17217447210047,1.71072446022705,0.514137463516618,0.300343057843917,0,1.34557301214433,0.43596006883328,1.54010400223995,1.68053230485111,3.57656445851882,2.535908257668,3.45719551560332,5.2003718455683,0.514414748524284,0,2.1313774321288,3.43147184779554,2.17048642156577,0.823240336780769,0.65147236858747,1.06617584622764,1.58390374586686,4.22015127883421,2.61460037580088,3.19913571782583,0,0,2.10833939483032,0.718874566474748,2.29723871668228,1.42636905040718,2.17171960001369,2.26023954805422,3.04403637507822,0.224170287987055,0.788123040807709,0.431255149719035,0.641715181398742,0.76228387266739,0,0,0.837581326671744,0,5.24304916763028,2.99161459204025,9.11714129559278,33.0040112724486,10.0034104211935,9.22301080579101,9.98260135347874,6.60187258549499,4.41566762095017,2.92853537481783,0.601892199455438,0,0,0.664225598535437,0.184369168541703,1.12948698808508,0.391602314925481,0,1.24060815673732,1.2942852049117,0.853820462427555,0,0,0,0.248107807818777,1.07423381301644,1.68396056659844,0.512556597022804,0,1.44768529029247,0,1.23367755042124,0.355123450626254,0.657017248110473,2.59627214591811,0.929683027679674,0.604297247958111,1.00253235151642,0.184161977871793,1.03333003348146,0.364182336013434,0.524497659837696,0,0.231046011313244,0,0,0.211103257785751,1.13733384070897,1.87103075804167,1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| ||
|short_description=p12@CUL4B | |||
}} | }} |
Latest revision as of 06:39, 19 September 2015
Short description: | p12@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CUL4B_5end |
Coexpression cluster: | C964_Nucleus_Anulus_meningioma_large_Olfactory_Chondrocyte_Mesothelial |
Association with transcript: | 65bp_to_NM_001079872, uc004esv.2_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | Q13620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.24e-13 | 76 |
skin fibroblast | 4.90e-12 | 23 |
mesodermal cell | 2.08e-10 | 121 |
Ontology term | p-value | n |
---|---|---|
integument | 7.30e-08 | 46 |
integumental system | 7.30e-08 | 46 |
skin of body | 3.28e-07 | 41 |
intervertebral cartilage | 7.70e-07 | 5 |
symphysis | 7.70e-07 | 5 |
nonsynovial joint | 7.70e-07 | 5 |
fibrous joint | 7.70e-07 | 5 |
cartilaginous joint | 7.70e-07 | 5 |
developing mesenchymal condensation | 7.70e-07 | 5 |
pre-cartilage condensation | 7.70e-07 | 5 |
cartilaginous condensation | 7.70e-07 | 5 |
cartilage element | 7.70e-07 | 5 |
post-cranial axial skeletal system | 7.70e-07 | 5 |
vertebral column | 7.70e-07 | 5 |
intervertebral disk | 7.70e-07 | 5 |
intervertebral joint | 7.70e-07 | 5 |