FFCP PHASE1:Hg19::chr4:70901976..70902022,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:70901976..70902022,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_at_chr4:70901976..70902022,+ | |||
|id=chr4:70901976..70902022,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006298;2.42e-50;1!UBERON:0008814;9.18e-26;2!UBERON:0010056;9.18e-26;2!UBERON:0006601;1.24e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.05e-79!2;UBERON:0001044!8.15e-60!6;UBERON:0003293!8.15e-60!6;UBERON:0003294!8.15e-60!6;UBERON:0010047!8.15e-60!6;UBERON:0000167!8.15e-60!6;UBERON:0001831!6.62e-41!1;UBERON:0001567!6.62e-41!1;UBERON:0008801!6.62e-41!1;UBERON:0001736!9.91e-41!1;UBERON:0006298!9.91e-41!1;UBERON:0002363!3.30e-40!1;UBERON:0007647!3.30e-40!1;UBERON:0010115!3.30e-40!1;UBERON:0003408!2.40e-36!10;UBERON:0000078!1.04e-35!18;UBERON:0000166!9.67e-31!21;UBERON:0000165!2.81e-23!28;UBERON:0000930!2.81e-23!28;UBERON:0004089!3.11e-21!2;UBERON:0002360!6.96e-21!2;UBERON:0000094!6.96e-21!2;UBERON:0007645!6.96e-21!2;UBERON:0000161!8.68e-19!35;UBERON:0001723!1.83e-14!3;UBERON:0001033!1.83e-14!3;UBERON:0010056!1.83e-14!3;UBERON:0001444!6.59e-14!48;UBERON:0002365!2.30e-12!31;UBERON:0002330!2.30e-12!31;UBERON:0001004!1.69e-09!72;UBERON:0007023!3.07e-09!115;UBERON:0003102!2.41e-07!95;UBERON:0001041!3.89e-07!98;UBERON:0002530!7.38e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.68e-99;2!UBERON:0001044;2.58e-74;6!UBERON:0003293;2.58e-74;6!UBERON:0003294;2.58e-74;6!UBERON:0010047;2.58e-74;6!UBERON:0003408;2.58e-74;6!UBERON:0000167;2.58e-74;6!UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001736;2.42e-50;1!UBERON:0001041;1.46e-32;14!UBERON:0000165;5.86e-29;28!UBERON:0004089;4.32e-26;2!UBERON:0000161;2.73e-24;19!UBERON:0000166;2.73e-24;19!UBERON:0001723;1.12e-17;3!UBERON:0001033;1.12e-17;3!UBERON:0002365;5.86e-15;31!UBERON:0002330;5.86e-15;31!UBERON:0007811;8.19e-13;52!UBERON:0004921;1.58e-12;33!UBERON:0000153;4.69e-11;54!UBERON:0001555;2.19e-10;54!UBERON:0000033;4.33e-10;50!UBERON:0001444;6.30e-09;48!UBERON:0002530;7.36e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.68e-99,2;UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001736,2.42e-50,1;UBERON:0006298,2.42e-50,1;UBERON:0003408,4.18e-45,10;UBERON:0000166,1.49e-36,22;UBERON:0000165,5.36e-28,29;UBERON:0000930,5.36e-28,29;UBERON:0004089,4.32e-26,2;UBERON:0000161,9.32e-23,36;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3;UBERON:0001444,5.55e-17,49;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0000033,5.62e-15,56;UBERON:0000153,1.29e-13,62;UBERON:0007811,1.29e-13,62;UBERON:0001004,1.50e-11,74;UBERON:0001041,5.98e-10,87;UBERON:0003102,7.68e-09,99;UBERON:0002530,1.83e-08,59;UBERON:0002553,3.25e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0004921,1.75e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,232.461293147445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,104.545248193327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,198.171050430762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08858373948481,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:70901976..70902022,+ | |||
}} |
Latest revision as of 06:17, 30 July 2015
Short description: | p@chr4:70901976..70902022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:70901976..70902022, + |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.68e-99 | 2 |
saliva-secreting gland | 2.58e-74 | 6 |
gland of oral region | 2.58e-74 | 6 |
gland of foregut | 2.58e-74 | 6 |
oral gland | 2.58e-74 | 6 |
oral cavity | 2.58e-74 | 6 |
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
submandibular gland | 2.42e-50 | 1 |
submandibular gland primordium | 2.42e-50 | 1 |
gland of gut | 4.18e-45 | 10 |
oral opening | 1.49e-36 | 22 |
mouth | 5.36e-28 | 29 |
stomodeum | 5.36e-28 | 29 |
midface | 4.32e-26 | 2 |
orifice | 9.32e-23 | 36 |
tongue | 1.12e-17 | 3 |
gustatory system | 1.12e-17 | 3 |
future tongue | 1.12e-17 | 3 |
subdivision of head | 5.55e-17 | 49 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
head | 5.62e-15 | 56 |
anterior region of body | 1.29e-13 | 62 |
craniocervical region | 1.29e-13 | 62 |
respiratory system | 1.50e-11 | 74 |
foregut | 5.98e-10 | 87 |
surface structure | 7.68e-09 | 99 |
gland | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
adult organism | 8.86e-08 | 114 |
subdivision of digestive tract | 1.75e-07 | 118 |