FFCP PHASE1:Hg19::chr4:71859413..71859473,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2704 | |||
|TSSclassifier=strong | |||
|UniProt=D6RCP9,D6RFG8 | |||
|association_with_transcript=58bp_to_ENST00000504730,ENST00000504952_5end | |||
|cluster_id=chr4:71859413..71859473,+ | |||
|coexpression_cluster_id=C4393 | |||
|description=CAGE_peak_3_at_DCK_5end | |||
|id=chr4:71859413..71859473,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.92e-08!682;CL:0000548!8.10e-08!679;CL:0000004!8.10e-08!679;CL:0000255!8.10e-08!679;CL:0000945!2.57e-07!24;CL:0000826!2.57e-07!24;CL:0000003!3.93e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.35e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.52e-07,24;CL:0000826,2.52e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.01e-27!235;DOID:14566!2.80e-26!239;DOID:2531!1.14e-19!51;DOID:0060083!1.14e-19!51;DOID:0050686!8.84e-17!137;DOID:1240!1.25e-15!39;DOID:305!9.86e-13!106;DOID:8692!3.31e-12!31;DOID:0050687!2.93e-11!143;DOID:0060058!4.57e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.01e-13;39!DOID:2531;5.38e-13;51!DOID:0060083;5.38e-13;51!DOID:8692;3.61e-12;31!DOID:0060058;1.71e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.45e-27,235;DOID:14566,2.54e-26,239;DOID:2531,8.09e-21,51;DOID:0060083,8.09e-21,51;DOID:1240,2.01e-16,39;DOID:0050686,3.59e-16,137;DOID:8692,1.01e-12,31;DOID:305,1.58e-12,106;DOID:0050687,3.60e-11,143;DOID:0060058,1.56e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.704772020479856,0,0,0.872338524100369,0,0,0,1.96587149201207,1.39560233594486,2.62129646556207,1.58260186937072,0.37129905888014,0.331397375727916,0.672325146451775,0.602694528023977,0,1.46379839637152,1.47745269692145,2.65200898617529,0.940364164434263,1.71741592278634,4.24310717725941,5.64941878176613,5.42535180810454,6.23964479819588,6.69041641166274,0.786728553697808,1.91914699048606,0.619264493264304,0,0.30120591877825,0.369754010166788,44.9309763365749,23.1735848954497,7.04641054403633,0,0.601633342410425,0,0.223915474239924,0,1.03030227053675,0.290796477559129,0,0.485168122375632,0.464858073811369,0.411167888021826,0.619412741790207,0,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0.398927315243264,1.27867425159808,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0.632924774881769,0.422510572623884,0.637812899895131,0,0,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0,3.51992488922645,2.73069305631066,0.889509253863555,2.56038133539904,4.40435585739614,3.4485146397269,3.30522436392431,1.90810750907073,2.84606484554724,3.52342313622563,3.05818582500183,2.64342657158052,1.12101712596307,6.58460211937693,0.196709770113833,0.786021525498329,0.616804496998528,1.5046784585161,0.32592226663359,0.473447805734733,3.89653456815823,3.45372416344038,0.294605907474837,0.664601683750863,0.541607727530031,4.86747014957566,4.68213651215562,6.08420247033602,5.25065033793112,5.21645554323094,0.14828656316206,1.07016331235885,1.04535523804977,6.45863253376127,0,0,0.506039384039006,0.318565414324097,0,0.950452044448374,0.150575119077773,0.639933055772092,0,0.473554504088034,0.821127996921047,0.80642697289893,0.802320587350522,0.724122019413995,0,0,1.91793842765295,1.44575660953827,0,1.30361867064741,0,0,2.26883561193763,1.55210578223795,1.75669571386252,0.589405839739707,0.364295288292542,1.48313777113772,0.649094787309367,1.56716763569341,1.59549552622638,9.06264372360299,20.0198218773045,8.91498003190956,1.98762407366705,3.4409383804245,0.694281003215189,3.39184765154406,0.838998872419812,0.825354125820202,1.46296476575767,1.55050055501597,0.71153252537342,0.33472061276467,0.402829317109147,1.52054421143703,1.22031028774085,2.94130464276695,0,3.03619076165871,2.91888184414021,3.71617885594963,4.5994991239765,0.949265659568129,1.28241220751285,0,0,0.436094052142534,0.496971951695318,3.54565432660823,0.794455084879313,0.573673241497627,2.83734705758686,2.80338800071154,2.1349799145941,1.2333377420858,2.17847724779836,0.808264032418128,2.94231425604226,0.756787138224657,1.15235184896,1.17160715916898,0.624320153660641,2.2818872861778,1.79338416662161,2.81842796745036,3.0755859429945,3.51127016755621,1.22492502752936,3.19369225010597,0.516628905878827,1.18800285728205,0.989067717114227,0,0,4.54507507675979,4.12891115577482,3.3247693858102,2.63386572528503,1.22595118319608,1.35214253015937,4.99101605904093,1.79389635688862,0.640672166455702,1.27159140695737,3.60109315301283,0.515262646192195,0,0.930584281657949,8.94514560878711,1.75386609290158,3.28163906517349,0.920498986422993,0.323292113637624,0.355009592516614,3.72782763442269,2.88253006927829,0.386521706326594,1.36373060295417,2.00763216772303,2.92736894711029,3.97589304964456,3.83440011469411,3.52447587052259,3.02785021050754,4.37972830890996,0,0,6.90674606762403,0.464367928031979,0,4.8505788016336,4.21461725195254,5.3022426574366,3.30881918197182,6.10062443458737,5.21995362044413,5.79774625088707,4.90553662813365,6.15595451114225,1.4763109092493,0,0.8231480226628,0,0,0.982827216677626,0,8.82926198829301,6.76436411987125,0.686271241194102,0.219500570817251,1.1240175325762,1.3068766413512,1.11106134190236,2.6064664424826,0,1.44331342025273,1.62302566965108,0.352226082707465,0.866198686566443,2.77791307545966,2.09279567458058,3.1608175918371,0.858486162094873,0.984868024349589,5.14809383306323,7.8774516013026,0,3.86358894857377,1.13420077793909,2.95543124919399,5.23141089325132,1.53353071666084,3.4486426652716,5.45900290882001,0.621984346622316,0.576479813667846,0.88369703398466,8.06423257510547,2.67391897890794,0,3.4214489204541,4.8328921570562,4.20480280981484,0.285826432630578,3.58819469905154,0.87192013766656,6.67378400970645,0.258543431515556,7.15312891703765,4.22651376278,0.531876233169741,5.2003718455683,3.34369586540785,2.83698264046557,3.72991050622539,0.857867961948885,0,0,2.60588947434988,1.06617584622764,6.33561498346743,0.904318131178758,0,1.89948683245908,1.2162378064119,0.502257091432126,2.10833939483032,0,0,1.42636905040718,2.31650090668127,2.4657158706046,4.47652408099739,25.2191573985436,0.788123040807709,1.07813787429759,0.641715181398742,2.28685161800217,3.90419561572865,0.773288812777695,1.84267891867784,1.91381625495949,1.49801404789436,2.99161459204025,0,0.24538298343828,0,0.813795071099207,1.66376689224646,1.42743191037729,0.946214490203608,0.937131319941706,0.300946099727719,0,0,1.99267679560631,1.47495334833363,1.82455590382974,0.195801157462741,1.02943027143257,0.82707210449155,0.215714200818617,0.426910231213777,0.606255142892519,1.66435439510497,0.604780586659361,0.496215615637554,1.38115775959256,1.40330047216537,0.512556597022804,0,1.12597744800525,0,7.09364591492216,4.97172830876756,7.47357119725663,2.07701771673448,3.48631135379878,7.73500477386382,0.601519410909855,0.736647911487171,5.39627906373652,3.27764102412091,1.04899531967539,0.902399225814824,2.54150612444569,1.56869953835371,1.46139224653261,2.21658420675039,2.27466768141793,1.19065593693561,4.53423423814493,0,1.35473218771926,0,6.37190682612596,5.81753206250107,3.1342465661105,67.7513018835938,58.0386701275279,4.10320200186223,1.64007322849853,0.650756789328606,0.206082023295445,9.98107166519943,9.90113999047056,1.14853107599234,1.30012049207304,1.6068392984416,0.290012154876366,2.00263202249038,2.14905144616581,3.30807773962873,1.28904293841928,1.0151168573996,3.57951835147624,1.06838442776085,0,0.192190067365106,1.27612712494584,0.10115778085555,0.929691098594572,0.94443704049192,1.3940745403212,0.616067160352178,0.532306030317022,2.60979897622522,0.9266210955196,0.858749320451947,3.34942532423701,2.53103539774981,1.90630193923825,1.79128453917934,0.855877976067841,1.59101623962968,1.56989728039846,2.33834194858309,1.37268514868027,2.82749765629647,0.202182481573316,3.17020642346017,2.10629228119491,0.975267478179181,0.487426979262569,1.05650146756755,2.32049849393576,0.565621727814851,2.26016233240486,0.551365343546124,1.32687795048244,0.438450885253763,0.578775534266688,1.31178950409327,1.01455188481352,2.16876448669825,1.40847801266121,2.72481569187698,0.687743287091848,1.426684205925,4.61189383291777,0.844430541190656,0.329294892959902,4.9331512589543,0.349934720244983,0.577332676353072,3.35151137767894,2.17781969722645,0.470719003883896,0.43050537267123,0,0.443430153536676,0.459446800413919,1.01489521846434,0,0.569647187174163,0.952927101831156,1.23408681925858,1.29694662238543,0.540031437238115,3.96562588147135,3.63201841833409,0.962479855263359,2.94048259177238,16.3506794110632,7.79053750072802,11.8806878391852,1.75368900001705,3.39284931435788,4.5961288831768,10.5836791361941,4.86932910411833,3.93116049358842,21.9105291871865,5.32711645628279,2.50634477090067,2.70866844482565,8.67175605559977,7.46658916606876,5.96184732766457,11.679181721696,9.21722292925374,12.5258620419753,8.34245708559543,7.42474762527753,6.96015434738106,6.15436994738562,1.6227340708559,3.3307196799782,2.81974010175699,6.36277837387947,0.586032717087576,0.849523652246594,7.46670674659105,6.5351313765475,0.23874448473769,5.04839957415486,0,0,0.281338832821026,1.55832187032068,2.80166586185491,6.75601306009579,0.398495976502139,8.56480138146558,3.27512572210559,3.68167257007757,4.80030741298171,1.24415835064723,3.86433909933505,0.895105873378046,3.5810065915881,0.197286811273867,2.3948309234694,2.22273980289274,0,0.0927680981618513,0,2.86470537193757,2.44887999989348,1.44999915086959,2.50345586228099,4.57656570526979,7.32801813480603,6.20538071834636,0.291604613383254,17.8833744781291,4.42870692906919,0.361789315876224,0,0.221158519862449,0.886642856860642,0.219385397153973,2.28770773389879,1.53366118706464,0.384751292518985,1.59518878185802,0.69169171316418,3.50054813198111,1.95565269459615,1.27600463892768,2.1983422416447,0.533034776018635,5.10966490978682,3.76752615348059,6.81467895790641,6.9934654791326,4.11731322067253,4.86682602229944,3.22581345631115,7.31108263309742,2.10998064528027,6.03961390188847,5.93682900022551,7.14082511148901,0.995261931078505,0.265372693510018,1.22206028986725,2.96521128680622,4.07760998523459,3.34150238417457,0.404406797884062,1.60515529459758,0.468528891450678,18.9752980784293,1.17398771359254,1.45668227720456,1.18375320854817,2.41981432097328,0.30607276163049,3.72800819808079,3.75808548536231,2.79958116772567,2.65861549082874,0.661983911750998,1.56966459203613,1.19472429772959,1.42304773014896,1.66409607615766,1.90915712168644,2.6457947301882,4.44001953560053,0.17472666824203,0.687944129886466,7.74050650312681,9.42852190411794,6.81558293541637,0.484945082442097,0.970817393606503,0.90392296312213,2.74083849293502,5.96143835108969,0.253243183823515,4.10657903743086,1.12222348352147,1.06726497369676,5.59466906829965,0.72045208577053,3.20702469264564,12.8696248396473,1.4405479798815,1.36677789121976,3.53541051925193,1.63085047288337,2.40586546518366,4.89591444654345,3.75635766871975,0,0.684526894459965,5.10986352267889,1.71906176567983,3.41753560563109,1.11712960508902,0,0,2.1964690054889,0.858452096273142,0.223171457441873,0.940568614814168,1.44119953416961,2.32991899054908,7.40561913687902,6.59326867049332,5.7967047714599,1.96854963029498,16.1726064245648,0.795229689809303,0.408610218334727,3.53656926623042,4.26372253451425,3.32352270423348,0.674921674654501,1.5476039091159,0.303747783290123,1.67717343799633,0.394028536495991,0.734364233889974,0.528001682597033,0.35857467866569,3.07064315711112,0.714695326373367,0,1.017074150619,0,0,1.63293680054705,4.7892076624995,0.903017728242729,5.62280471891892,3.17273856256352,0.146552233678082,9.27548222385549,0.904980694530854,0.39669780522807,0.171086837884329,0,1.17466153824464,1.57204305099666,1.65695622138878,0,3.16178611036711,27.7687124308443,0,0,0,0.306345576763462,0.327872630709804,1.25643277000187,0.886068179966986,0.122026264901963,0.250381861413,0,0.332787154610557,0.745156835296601,2.07522952404346,4.24933387071162,0.151649117541648,0.856396000634902,0.941063278792687,8.43002830452387,1.7390523433299,1.64180283175561,0.467426619694449,0.554805861502613,0.568209015825267,1.0062716070103,0,0,0.302461847526478,2.02068360757615,3.54852359975121,1.75226443880073,0.899606224327209,0.621051827505038,0.829412415681711,0.797525143673985,0.521745061811734,0.150257608997218,0.761610424337591,1.62748293281865,0.545545977607678,0.322231671127465,0.464033759878494,1.59238355479446,11.6008051752315,2.06037423109676,1.6837474438296,0,0.385239660814607,4.71771501024837,1.56596575179127,3.62729480819636,1.389134845943,1.95789363605174,5.90993175568908,1.54400723580486,2.85069264452319,6.00743096215996,4.05119480368921,1.52048196587765,1.02496607435179,3.10887307558079,2.73473960559644,0.691292180758654,1.7537427795545,0.930053882193542,2.78061170234935,4.25892803500336,2.21195617878347,1.26787274015176,6.59958406321269,10.1357143209434,1.03328987796489,5.67515953566836,11.598674865866,0.139879507719444,0,2.30209868346573,5.28341575843741,1.25812753484717,1.85656384926424,1.69732529954025,0,0.247871528518004,0,2.22603045457393,18.059339605287,3.20228299314188,0,0.6124909547064,0.706521476061055,1.41696576325585,0.798169295285756,0.615349092722265,1.26035848110859,0.276629009856872,0.322951291263702,0,2.64998839952769,1.76954585021611,4.95257216008533,3.35024431835981,0.381382095467167,0,0.795664888465099,0.300841313397029,1.61364054962816,0,4.97622719514703,4.9131575253029,1.92212912082159,0.540300676947157,0,0.413373593002368,0.253663240775627,0.546974809018219,1.09651553371436,0,0.175871244359621,3.96063525682745,0.535701835878287,2.35398605553177,0,0,0.443511850813194,7.72067716623721,3.08678416987353,1.56330385846713,0.460409414939944,3.30942754475111,6.00649570217173,0.156986185701028,0.314231179832004,0.560544326627578,1.82631744101899,2.80705868584208,1.43325506366115,0.214429632529969,10.1128711508945,3.83596703714813,2.26015753993353,0,0,0.6828739083758,0,0,2.12997601315018,2.04512171421978,0.846774100381858,2.97838929107265,1.5510319283216,3.82215575590973,0.782988022584546,18.4522439196657,1.95068679971631,0,0.102662806856247,0,1.45713297917742,19.1830360038927,7.95803100645473,0.356760272332706,2.48481380485712,6.26660945448946,6.18947658623362,0.926089897295336,2.18559560503957,0.940634592723046,0,0.707029641304878,0.392616934229891,0.891139200981258,1.6906229103336,6.79708458751268,1.31577485171795,3.0939786227317,7.5955278502946,0.535661815816973,0.705789743431384,1.36410323371586,1.46067277649303,2.75237570042724,0.573358332605805,0.473314686579554,0.475940431336403,0.436350690340377,2.1161073620616,1.85997509083376,0.924351257262837,1.29787968637137,3.02799419604189,3.93356059069304,3.54755802832024,1.73381010561369,1.06886962106224,1.65410819162721,0.752122617877125,0.378893491091197,1.07185652062471,2.48750831837634,0.620597975171371,1.27940389140589,3.57096647195611,5.87759079507656,5.15220128655621,3.58821960257963,0.12729431655633,1.21270313374932,0.870866991587845,0.684466602170562,3.56965880977314,0.286888821570705,1.33064142618405,6.18664841443406,3.30854772220918,0,0.538951212639521,4.69281884806909,0.122241444182866,1.22068853494722,0.665756774185513,1.40891655513718,0.641136984606466 | |||
|short_description=p3@DCK | |||
}} |
Latest revision as of 11:32, 18 September 2015
Short description: | p3@DCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DCK_5end |
Coexpression cluster: | C4393_Reticulocytes_Burkitt_Dendritic_non_lymphoma_acute_NK |
Association with transcript: | 58bp_to_ENST00000504730, ENST00000504952_5end |
EntrezGene: | DCK |
HGNC: | 2704 |
UniProt: | D6RCP9D6RFG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.52e-07 | 24 |
pro-B cell | 2.52e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.45e-27 | 235 |
disease of cellular proliferation | 2.54e-26 | 239 |
hematologic cancer | 8.09e-21 | 51 |
immune system cancer | 8.09e-21 | 51 |
leukemia | 2.01e-16 | 39 |
organ system cancer | 3.59e-16 | 137 |
myeloid leukemia | 1.01e-12 | 31 |
carcinoma | 1.58e-12 | 106 |
cell type cancer | 3.60e-11 | 143 |
lymphoma | 1.56e-07 | 10 |