FFCP PHASE1:Hg19::chr5:142623955..142623962,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:142623955..142623962,+ | |||
|description=CAGE_peak_at_chr5:142623955..142623962,+ | |||
|id=chr5:142623955..142623962,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.64e-08!254;CL:0000223!4.78e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.89e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.62e-10,4;CL:0000076,1.58e-08,63;CL:0000223,4.53e-08,58;CL:0000066,3.63e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006238;8.68e-10;10!UBERON:0007123;5.79e-08;5 | |||
|ontology_enrichment_disease=DOID:305!3.65e-21!106;DOID:0050687!4.10e-20!143;DOID:162!1.11e-19!235;DOID:14566!2.38e-19!239;DOID:1749!6.38e-12!14;DOID:120!9.02e-09!27;DOID:299!3.88e-08!25;DOID:193!8.14e-08!29;DOID:0050686!5.22e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.15e-28;14!DOID:170;1.26e-11;6!DOID:1793;1.89e-10;4!DOID:4074;1.37e-09;2!DOID:4905;1.37e-09;2!DOID:3498;1.37e-09;2!DOID:3910;1.59e-09;2!DOID:4929;1.59e-09;2!DOID:3093;6.08e-09;11!DOID:3908;2.71e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.43e-29,14;DOID:305,4.41e-17,106;DOID:0050687,2.93e-16,143;DOID:162,4.66e-16,235;DOID:14566,1.49e-15,239;DOID:170,1.25e-11,6;DOID:1793,1.62e-10,4;DOID:4929,8.75e-10,2;DOID:4074,1.23e-09,2;DOID:4905,1.23e-09,2;DOID:3498,1.23e-09,2;DOID:3910,1.29e-09,2;DOID:3093,7.40e-09,11;DOID:3908,2.26e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001048!3.37e-07!168;UBERON:0000344!5.85e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.89e-10;4!UBERON:0004785;2.89e-10;4!UBERON:0004903;1.59e-09;2!UBERON:0002173;1.59e-09;2!UBERON:0002186;1.59e-09;2!UBERON:0002046;5.79e-08;5!UBERON:0001264;5.49e-07;10!UBERON:0000974;5.66e-07;6!UBERON:0000344;7.06e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.29e-10,4;UBERON:0004785,2.29e-10,4;UBERON:0004903,1.29e-09,2;UBERON:0002173,1.29e-09,2;UBERON:0002186,1.29e-09,2;UBERON:0002046,6.02e-08,5;UBERON:0004117,6.02e-08,5;UBERON:0007689,6.02e-08,5;UBERON:0007123,6.02e-08,5;UBERON:0003091,6.02e-08,5;UBERON:0001264,5.20e-07,10;UBERON:0000344,6.40e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0.189069634328136,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,1.43418310374407,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0.538168907066586,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0.337552664482532,0.194874010322397,0.757301322732344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.716468181622786,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0.771048469013278,0.355123450626254,0.492762936082855,1.55776328755086,0.581051892299796,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.178064071293475,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40963376167696,0,0,0.307160702099232,0,0,1.8922479853894,0,0,0,0,0,0.20453736500431,0,0,0.359473404589307,0,0,0,0,2.22273980289274,0,0,0,0.260427761085233,0,0,2.38966241399549,1.5255219017566,0.472775363535873,0,0,0,0,0,0,0,0.295547618953547,0,0.871507708151921,0.139423744278603,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,1.13852239634511,0,0.421996129056054,0.816164040795739,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,4.12726645207958,0,0,0,0.31593289814244,1.9542044523884,0.103688191397247,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,2.27687636823834,0.138674673013139,0,0.293977192243133,2.78589461057288,0,1.0319161948297,0,0.146178634172371,0,0,0,0,1.23337732182076,0.993573058514948,0,0,0.721429382263803,0,0,0,0,0,0.864328787928898,0.745515213392595,0,2.17446729717782,2.196659772559,2.24396078799908,2.31160471921215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0.717149357331379,2.49489756515279,0,0,0,0,0,0,2.39460383124975,0.164185041498678,0.340776043570843,0.339936274560377,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,3.7494122388632,0.151649117541648,0,0.235265819698172,0,0,0.298509605773748,0.701139929541673,0,0.378806010550178,0.50313580350515,0.889811221596536,0,0.151230923763239,0.777186002913902,0.295710299979268,0.159296767163702,0,0.621051827505038,0,0,0.521745061811734,0.150257608997218,1.14241563650639,0,0.363697318405119,0.537052785212442,0,1.19428766609585,0,0,0,0,1.15571898244382,0.214441591374926,2.87093721161733,0.226705925512272,0.694567422971502,0.489473409012935,0.179088841081487,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0.982829546539238,0.245772908753719,1.05656061679314,0,0,0,1.70254786070051,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0.294443155503077,1.41563668017288,2.75142897782519,3.69682131681082,0,0.690359926060101,0,0,0.20170506870352,0,0,1.14640342257068,1.92212912082159,0.0675375846183947,0,0,0,0,0,0,0,3.19406069098988,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,1.18193840883968,0.667388411352415,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0.354996002191696,0,0,0.4582137370881,0.31020638566432,0,0.223710863595585,0.588901401691458,0.731507549893617,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21397089490184,2.82315897372553,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,2.13050538903166,0,0,0,0,0,0,0,1.54666210360852,0.213454691755431,1.9307228228694,3.86248369058324,0,0,0,0,0,0 | |||
|short_description=p@chr5:142623955..142623962,+ | |||
}} |
Latest revision as of 10:55, 30 July 2015
Short description: | p@chr5:142623955..142623962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:142623955..142623962, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.62e-10 | 4 |
squamous epithelial cell | 1.58e-08 | 63 |
endodermal cell | 4.53e-08 | 58 |
epithelial cell | 3.63e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.29e-10 | 4 |
respiratory system mucosa | 2.29e-10 | 4 |
bronchoalveolar duct junction | 1.29e-09 | 2 |
alveolar duct | 1.29e-09 | 2 |
bronchiole | 1.29e-09 | 2 |
thyroid gland | 6.02e-08 | 5 |
pharyngeal pouch | 6.02e-08 | 5 |
thyroid diverticulum | 6.02e-08 | 5 |
pharyngeal pouch 2 | 6.02e-08 | 5 |
thyroid primordium | 6.02e-08 | 5 |
pancreas | 5.20e-07 | 10 |
mucosa | 6.40e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.43e-29 | 14 |
carcinoma | 4.41e-17 | 106 |
cell type cancer | 2.93e-16 | 143 |
cancer | 4.66e-16 | 235 |
disease of cellular proliferation | 1.49e-15 | 239 |
endocrine gland cancer | 1.25e-11 | 6 |
pancreatic cancer | 1.62e-10 | 4 |
tubular adenocarcinoma | 8.75e-10 | 2 |
pancreas adenocarcinoma | 1.23e-09 | 2 |
pancreatic carcinoma | 1.23e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.23e-09 | 2 |
lung adenocarcinoma | 1.29e-09 | 2 |
nervous system cancer | 7.40e-09 | 11 |
non-small cell lung carcinoma | 2.26e-08 | 5 |