FFCP PHASE1:Mm9::chr17:28938095..28938118,+: Difference between revisions
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{{FFCP|EntrezGene=268936|HGNC=|UniProt=B2KF05|association_with_transcript=24bp_to_NM_001081315,uc008brp.1_5end|description=CAGE_peak_2_at_Brpf3_5end|id=chr17:28938095..28938118,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.72e-10!130;UBERON:0000925!3.72e-10!130;UBERON:0006595!3.72e-10!130;UBERON:0002107!4.21e-10!22;UBERON:0007499!4.21e-10!22;UBERON:0006925!4.21e-10!22;UBERON:0009497!4.21e-10!22;UBERON:0000015!4.21e-10!22;UBERON:0002423!4.21e-10!22;UBERON:0006235!4.21e-10!22;UBERON:0008835!4.21e-10!22;UBERON:0003894!4.21e-10!22;UBERON:0004161!4.21e-10!22;UBERON:0008836!4.21e-10!22;UBERON:0009854!6.97e-10!23;UBERON:0009856!6.97e-10!23;UBERON:0004923!1.45e-09!24;UBERON:0001007!1.64e-09!128;UBERON:0001555!1.64e-09!128;UBERON:0007026!1.64e-09!128;UBERON:0004921!2.92e-09!126;UBERON:0004185!2.92e-09!126;UBERON:0003929!1.17e-08!55;UBERON:0005172!1.78e-08!49;UBERON:0005173!1.78e-08!49;UBERON:0002417!1.78e-08!49;UBERON:0000916!1.78e-08!49;UBERON:0000466!6.67e-08!79;UBERON:0002365!1.62e-07!25;UBERON:0002330!1.62e-07!25;UBERON:0005409!2.27e-07!59;UBERON:0005057!2.39e-07!51;UBERON:0000490!4.53e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.96e-10,22;UBERON:0007499,2.96e-10,22;UBERON:0006925,2.96e-10,22;UBERON:0009497,2.96e-10,22;UBERON:0000015,2.96e-10,22;UBERON:0002423,2.96e-10,22;UBERON:0006235,2.96e-10,22;UBERON:0008835,2.96e-10,22;UBERON:0003894,2.96e-10,22;UBERON:0004161,2.96e-10,22;UBERON:0008836,2.96e-10,22;UBERON:0009854,4.95e-10,23;UBERON:0009856,4.95e-10,23;UBERON:0004119,6.22e-10,118;UBERON:0000925,6.22e-10,118;UBERON:0006595,6.22e-10,118;UBERON:0004923,1.05e-09,24;UBERON:0001007,2.76e-09,116;UBERON:0001555,2.76e-09,116;UBERON:0007026,2.76e-09,116;UBERON:0004921,4.85e-09,114;UBERON:0003929,6.17e-09,55;UBERON:0005172,8.64e-09,49;UBERON:0005173,8.64e-09,49;UBERON:0002417,8.64e-09,49;UBERON:0000916,8.64e-09,49;UBERON:0005409,9.52e-08,47;UBERON:0002365,1.10e-07,25;UBERON:0002330,1.10e-07,25;UBERON:0000160,2.49e-07,31;UBERON:0000490,2.59e-07,66;UBERON:0002368,8.18e-07,60;UBERON:0001242,9.87e-07,13;UBERON:0001262,9.87e-07,13;UBERON:0004786,9.87e-07,13|phase1_expression=1.12104192973356,6.63053274514786,15.4699741392442,8.46899791659124,9.5170188689806,3.69334398206158,4.90586545250604,1.93684985162364,3.37892933164,3.04283884218592,0.34243593645101,0.558405112967355,1.02720437958723,1.57356724354195,5.99597571268193,8.50396123037269,11.1929900500503,0.788655413395594,1.64537320326887,0.84877930359606,1.78590909317247,0.992909512008853,0.522399578277871,1.75991665072747,2.98232065387321,11.4846392823004,6.8921919385452,6.03319451520489,2.85035129184561,4.28451220591882,3.54768817048488,0,0,0,3.46621943701529,2.82598897109437,5.51257261908397,1.25559489221072,2.3440060335714,1.0470474879476,1.76469446409304,1.36609096991689,3.39857247121808,1.88845226963366,2.33166941804883,1.65192076945513,0.782391344348039,1.09012578190223,1.31811709640683,0.972149495371417,0.55994568650145,0,2.34895648480831,5.80289713609076,2.68875039313971,0.514518872071894,1.14613375975503,3.09403255366465,1.01158230429799,0,0.633831403506179,1.69422266034566,0,0.899899717281399,0,0.7104801149461,0.898800331555214,0.768436610643109,1.24427534770173,1.35005938331691,1.26194976810829,1.14260393761521,0.662605622854841,2.08234358665422,2.01275489138296,0.919218786610021,2.20231761998777,0.638436690425939,0.46081959976873,2.1101806036831,1.82975287204819,2.6045668527838,0,0,0.45839474333043,2.06240009831567,0.569486723196412,0.931997229126503,2.19605960666234,0.604572480854284,1.73918693221007,7.74381489283248,8.15965600449301,1.61910957491345,4.54843492213368,4.92829575807069,1.68533304158102,1.02258193546835,1.03914401841148,1.06001872353102,1.26759077799012,0,5.09610479413291,0,1.5154372870785,3.04031838570118,1.51657333504435,4.11061966988616,0.776813650941515,2.3750742250372,2.94925055502431,2.43572382649713,2.53677046981664,3.3158980921577,5.76184664964954,2.89033160058254,2.96633961281249,1.3013942122792,1.76922110389975,2.42650274921114,4.63767188766826,5.33362778448744,1.86391761218122,1.46390398505774,0.628340120440365,2.55457055208591,2.51611761462433,1.79970819298022,1.39777249780371,0.149790639404823,0.457500602818626,1.63350657746724,0.347648640384553,0.767146371990992,0.20778804455956,1.29793010454206,0.712875546952214,3.23458123586242,0,0.420883711772948,1.30120442962704,0.229902104433473,1.62055916824814,1.50704817835715,3.06164246180975,2.3060469651273,2.99845518591132,1.29351685369508,1.94011193639558,1.70195472151037,0.351902248327898,1.97276159184817,1.94633074457919,1.0447564995665,1.85203922767149,2.9855140022774,0,1.54408744268829,1.13665399758237,0.828503090142008,0.703578179943289,0.720248245844059,1.18372367792605,1.37734962223183,1.23413690309903,0.697601834251224,0.804820204198858,1.5179494507732,0.329119699826961,0.656669856316381,1.21603214318784,0.584799949701329,0.43910023058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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268936 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=B2KF05 | |||
|association_with_transcript=24bp_to_NM_001081315,uc008brp.1_5end | |||
|cluster_id=chr17:28938095..28938118,+ | |||
|description=CAGE_peak_2_at_Brpf3_5end | |||
|id=chr17:28938095..28938118,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.72e-10!130;UBERON:0000925!3.72e-10!130;UBERON:0006595!3.72e-10!130;UBERON:0002107!4.21e-10!22;UBERON:0007499!4.21e-10!22;UBERON:0006925!4.21e-10!22;UBERON:0009497!4.21e-10!22;UBERON:0000015!4.21e-10!22;UBERON:0002423!4.21e-10!22;UBERON:0006235!4.21e-10!22;UBERON:0008835!4.21e-10!22;UBERON:0003894!4.21e-10!22;UBERON:0004161!4.21e-10!22;UBERON:0008836!4.21e-10!22;UBERON:0009854!6.97e-10!23;UBERON:0009856!6.97e-10!23;UBERON:0004923!1.45e-09!24;UBERON:0001007!1.64e-09!128;UBERON:0001555!1.64e-09!128;UBERON:0007026!1.64e-09!128;UBERON:0004921!2.92e-09!126;UBERON:0004185!2.92e-09!126;UBERON:0003929!1.17e-08!55;UBERON:0005172!1.78e-08!49;UBERON:0005173!1.78e-08!49;UBERON:0002417!1.78e-08!49;UBERON:0000916!1.78e-08!49;UBERON:0000466!6.67e-08!79;UBERON:0002365!1.62e-07!25;UBERON:0002330!1.62e-07!25;UBERON:0005409!2.27e-07!59;UBERON:0005057!2.39e-07!51;UBERON:0000490!4.53e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.96e-10,22;UBERON:0007499,2.96e-10,22;UBERON:0006925,2.96e-10,22;UBERON:0009497,2.96e-10,22;UBERON:0000015,2.96e-10,22;UBERON:0002423,2.96e-10,22;UBERON:0006235,2.96e-10,22;UBERON:0008835,2.96e-10,22;UBERON:0003894,2.96e-10,22;UBERON:0004161,2.96e-10,22;UBERON:0008836,2.96e-10,22;UBERON:0009854,4.95e-10,23;UBERON:0009856,4.95e-10,23;UBERON:0004119,6.22e-10,118;UBERON:0000925,6.22e-10,118;UBERON:0006595,6.22e-10,118;UBERON:0004923,1.05e-09,24;UBERON:0001007,2.76e-09,116;UBERON:0001555,2.76e-09,116;UBERON:0007026,2.76e-09,116;UBERON:0004921,4.85e-09,114;UBERON:0003929,6.17e-09,55;UBERON:0005172,8.64e-09,49;UBERON:0005173,8.64e-09,49;UBERON:0002417,8.64e-09,49;UBERON:0000916,8.64e-09,49;UBERON:0005409,9.52e-08,47;UBERON:0002365,1.10e-07,25;UBERON:0002330,1.10e-07,25;UBERON:0000160,2.49e-07,31;UBERON:0000490,2.59e-07,66;UBERON:0002368,8.18e-07,60;UBERON:0001242,9.87e-07,13;UBERON:0001262,9.87e-07,13;UBERON:0004786,9.87e-07,13 | |||
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| |||
|short_description=p2@Brpf3 | |||
}} |
Latest revision as of 04:36, 26 September 2015
Short description: | p2@Brpf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Brpf3_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_NM_001081315, uc008brp.1_5end |
EntrezGene: | Brpf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data