FFCP PHASE1:Hg19::chrX:2670039..2670048,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:2670039..2670048,+
|short_description=p4@XG
|description=CAGE_peak_4_at_XG_5end
|association_with_transcript=-42bp_to_ENST00000381174_5end
|EntrezGene=749...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7499 | |EntrezGene=7499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12806 | |HGNC=12806 | ||
|TSSclassifier=strong | |||
|UniProt=P55808 | |UniProt=P55808 | ||
|association_with_transcript=-42bp_to_ENST00000381174_5end | |||
|cluster_id=chrX:2670039..2670048,+ | |||
|coexpression_cluster_id=C2028 | |||
|description=CAGE_peak_4_at_XG_5end | |||
|id=chrX:2670039..2670048,+ | |||
|ontology_enrichment_celltype=CL:0002334!1.20e-26!12;CL:0002580!2.75e-11!3;CL:0000136!5.84e-10!15;CL:0000057!6.24e-10!75;CL:0002617!4.26e-08!2;CL:1000306!4.83e-08!4;CL:0002547!4.83e-08!4;CL:0002583!9.24e-08!2;CL:1000415!8.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.43e-38;12!CL:0002580;2.28e-18;3!CL:0002617;5.44e-13;2!CL:0002583;1.35e-12;2!CL:0000136;3.18e-11;13!CL:0002621;1.10e-08;3!CL:0002521;1.33e-08;3!CL:0000515;1.33e-08;3!CL:0002582;2.11e-08;3!CL:0002581;1.91e-07;1!CL:0002591;6.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.70e-38,12;CL:0002580,1.39e-18,3;CL:0002617,5.29e-13,2;CL:0002583,2.04e-12,2;CL:0000057,4.71e-12,76;CL:0000136,1.06e-09,15;CL:0002521,1.29e-08,3;CL:0002621,1.44e-08,3;CL:0002582,2.03e-08,3;CL:0002581,1.86e-07,1;CL:0002591,8.67e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;2.37e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.52e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000310!6.07e-12!10;UBERON:0002072!4.14e-11!5;UBERON:0001443!8.72e-11!11;UBERON:0003688!5.70e-09!6;UBERON:0002358!5.70e-09!6;UBERON:0003684!5.70e-09!6;UBERON:0001178!5.70e-09!6;UBERON:0000415!4.83e-08!4;UBERON:0007240!4.83e-08!4;UBERON:0005742!4.83e-08!4;UBERON:0005734!4.83e-08!4;UBERON:0004664!4.83e-08!4;UBERON:0004663!4.83e-08!4;UBERON:0003975!1.47e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;1.11e-18;5!UBERON:0000310;1.07e-14;10!UBERON:0001443;2.42e-13;11!UBERON:0001949;1.10e-08;3!UBERON:0002190;1.33e-08;3!UBERON:0002199;2.31e-07;46!UBERON:0002416;2.31e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.47e-18,5;UBERON:0000310,8.25e-15,10;UBERON:0001443,1.92e-13,11;UBERON:0002190,1.29e-08,3;UBERON:0002199,1.40e-08,46;UBERON:0002416,1.40e-08,46;UBERON:0001949,1.44e-08,3;UBERON:0003102,3.84e-07,99 | |||
|phase1_expression=4.1786027232228,2.78330681058278,0.140954404095971,6.00439790118782,0,0,0,2.52687949370732,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.77282716330412,1.72131935057184,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,1.64393548606981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0,0.89694817844431,1.92201649936711,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67195621010264,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.703702806881416,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,3.02367830757947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,0,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98486246255021,5.21770709179412,3.64858122762996,0.256278298511402,6.14048698880044,0,4.45254199334973,1.07946785661859,3.72879623157567,1.31403449622095,0,1.39452454151951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2130948894399,0,0,0,0,0,0,0,1.13008116620243,5.51365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.653174720218818,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,2.63806866539431,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 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|phase1_expression=4.1786027232228,2.78330681058278,0.140954404095971,6.00439790118782,0,0,0,2.52687949370732,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.77282716330412,1.72131935057184,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,1.64393548606981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0,0.89694817844431,1.92201649936711,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67195621010264,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.703702806881416,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,3.02367830757947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,0,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98486246255021,5.21770709179412,3.64858122762996,0.256278298511402,6.14048698880044,0,4.45254199334973,1.07946785661859,3.72879623157567,1.31403449622095,0,1.39452454151951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2130948894399,0,0,0,0,0,0,0,1.13008116620243,5.51365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.653174720218818,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,2.63806866539431,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p4@XG | |||
}} | }} |
Latest revision as of 19:16, 24 September 2015
Short description: | p4@XG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_XG_5end |
Coexpression cluster: | C2028_peripheral_Preadipocyte_Adipocyte_Gingival_Smooth_leiomyoma_Fibroblast |
Association with transcript: | -42bp_to_ENST00000381174_5end |
EntrezGene: | XG |
HGNC: | 12806 |
UniProt: | P55808 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.70e-38 | 12 |
preadipocyte of the breast | 1.39e-18 | 3 |
adipocyte of breast | 5.29e-13 | 2 |
subcutaneous preadipocyte | 2.04e-12 | 2 |
fibroblast | 4.71e-12 | 76 |
fat cell | 1.06e-09 | 15 |
subcutaneous fat cell | 1.29e-08 | 3 |
gingival epithelial cell | 1.44e-08 | 3 |
visceral preadipocyte | 2.03e-08 | 3 |
perirenal preadipocyte | 1.86e-07 | 1 |
smooth muscle cell of the pulmonary artery | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 1.47e-18 | 5 |
breast | 8.25e-15 | 10 |
chest | 1.92e-13 | 11 |
subcutaneous adipose tissue | 1.29e-08 | 3 |
integument | 1.40e-08 | 46 |
integumental system | 1.40e-08 | 46 |
gingival epithelium | 1.44e-08 | 3 |
surface structure | 3.84e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.52e-07 | 1 |