FFCP PHASE1:Mm9::chr18:4993775..4993787,+: Difference between revisions
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{{FFCP|EntrezGene=225115|HGNC=|MCL_coexpression_id=24|UniProt=D3Z2X9|association_with_transcript=-23bp_to_ENSMUST00000153016_5end|description=CAGE_peak_20_at_Svil_5end|id=chr18:4993775..4993787,+|ontology_enrichment_celltype=CL:0002563!4.85e-09!9;CL:0002251!4.85e-09!9;CL:0000066!3.93e-08!25;CL:0000239!4.33e-08!6;CL:0000677!4.33e-08!6;CL:0000212!4.33e-08!6;CL:0000584!4.33e-08!6;CL:0000223!7.04e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.15e-17,6;CL:0000677,1.15e-17,6;CL:0000584,1.15e-17,6;CL:0000075,4.87e-15,7;CL:0000066,2.53e-14,25;CL:0002563,1.55e-11,9;CL:0002251,1.55e-11,9;CL:0000223,1.70e-10,20;CL:0000682,1.04e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.55e-17!43;UBERON:0000344!8.99e-15!15;UBERON:0005409!6.80e-13!59;UBERON:0001242!1.57e-12!13;UBERON:0000060!1.57e-12!13;UBERON:0001262!1.57e-12!13;UBERON:0004786!1.57e-12!13;UBERON:0001007!6.62e-10!128;UBERON:0001555!6.62e-10!128;UBERON:0007026!6.62e-10!128;UBERON:0002107!7.45e-10!22;UBERON:0007499!7.45e-10!22;UBERON:0006925!7.45e-10!22;UBERON:0009497!7.45e-10!22;UBERON:0000015!7.45e-10!22;UBERON:0002423!7.45e-10!22;UBERON:0006235!7.45e-10!22;UBERON:0008835!7.45e-10!22;UBERON:0003894!7.45e-10!22;UBERON:0004161!7.45e-10!22;UBERON:0008836!7.45e-10!22;UBERON:0004119!1.64e-09!130;UBERON:0000925!1.64e-09!130;UBERON:0006595!1.64e-09!130;UBERON:0009854!3.37e-09!23;UBERON:0009856!3.37e-09!23;UBERON:0003350!4.85e-09!9;UBERON:0004808!4.85e-09!9;UBERON:0001277!4.85e-09!9;UBERON:0004921!9.93e-09!126;UBERON:0004185!9.93e-09!126;UBERON:0002365!4.71e-08!25;UBERON:0002330!4.71e-08!25;UBERON:0005172!1.72e-07!49;UBERON:0005173!1.72e-07!49;UBERON:0002417!1.72e-07!49;UBERON:0000916!1.72e-07!49;UBERON:0004923!2.30e-07!24;UBERON:0000485!6.17e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.81e-21,15;UBERON:0000160,7.98e-20,31;UBERON:0001242,1.76e-16,13;UBERON:0001262,1.76e-16,13;UBERON:0004786,1.76e-16,13;UBERON:0004923,1.47e-12,24;UBERON:0005409,7.19e-12,47;UBERON:0003350,1.55e-11,9;UBERON:0004808,1.55e-11,9;UBERON:0001277,1.55e-11,9;UBERON:0001007,5.76e-10,116;UBERON:0001555,5.76e-10,116;UBERON:0007026,5.76e-10,116;UBERON:0004119,1.05e-09,118;UBERON:0000925,1.05e-09,118;UBERON:0006595,1.05e-09,118;UBERON:0000485,2.65e-09,11;UBERON:0004921,4.58e-08,114;UBERON:0001962,4.21e-07,2;UBERON:0001961,4.21e-07,2;UBERON:0001744,4.21e-07,2|phase1_expression=0,5.23463111459042,3.63999391511629,10.5862473957391,7.01254021924886,1.6787927191189,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.95976510659561,4.12936705920906,1.72269589234506,3.01533397311352,2.15471232685889,1.14014051673824,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,2.15881276655127,3.24888208723835,4.48026887097336,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,3.17340679996253,0,0,0.257734922644187,0.80673409849337,1.55664630691409,0.570676878337677,1.89811624617805,0.823494773620054,0.251335208800269,0.795825888164603,0.779856348476481,0,3.6743468478698,2.58883655230677,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.632365371242573,3.24742325555125,2.35498091762062,1.85095745882701,2.07516838961004,0.333690211432188,0,0.224862112384854,0.811440485554012,0.964708639009667,0.763877555344259,1.15078454980324,0.162135226775035,0.549122826376163,1.43768206527355,0,0,0.252578877947112,3.58794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,1.23621034343337,0.64183841918363,0.252697211763798,0,0.754505365544305,0.0936415074698824,0.128050304809739,0.229741875822453,0.952587382566147,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.436039249896986,0.188218760830661,0.169229215783353,0.548783918618318,0,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0.935726433781634,0,0,0,0|short_description=p20@Svil}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225115 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z2X9 | |||
|association_with_transcript=-23bp_to_ENSMUST00000153016_5end | |||
|cluster_id=chr18:4993775..4993787,+ | |||
|description=CAGE_peak_20_at_Svil_5end | |||
|id=chr18:4993775..4993787,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.85e-09!9;CL:0002251!4.85e-09!9;CL:0000066!3.93e-08!25;CL:0000239!4.33e-08!6;CL:0000677!4.33e-08!6;CL:0000212!4.33e-08!6;CL:0000584!4.33e-08!6;CL:0000223!7.04e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.15e-17,6;CL:0000677,1.15e-17,6;CL:0000584,1.15e-17,6;CL:0000075,4.87e-15,7;CL:0000066,2.53e-14,25;CL:0002563,1.55e-11,9;CL:0002251,1.55e-11,9;CL:0000223,1.70e-10,20;CL:0000682,1.04e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.55e-17!43;UBERON:0000344!8.99e-15!15;UBERON:0005409!6.80e-13!59;UBERON:0001242!1.57e-12!13;UBERON:0000060!1.57e-12!13;UBERON:0001262!1.57e-12!13;UBERON:0004786!1.57e-12!13;UBERON:0001007!6.62e-10!128;UBERON:0001555!6.62e-10!128;UBERON:0007026!6.62e-10!128;UBERON:0002107!7.45e-10!22;UBERON:0007499!7.45e-10!22;UBERON:0006925!7.45e-10!22;UBERON:0009497!7.45e-10!22;UBERON:0000015!7.45e-10!22;UBERON:0002423!7.45e-10!22;UBERON:0006235!7.45e-10!22;UBERON:0008835!7.45e-10!22;UBERON:0003894!7.45e-10!22;UBERON:0004161!7.45e-10!22;UBERON:0008836!7.45e-10!22;UBERON:0004119!1.64e-09!130;UBERON:0000925!1.64e-09!130;UBERON:0006595!1.64e-09!130;UBERON:0009854!3.37e-09!23;UBERON:0009856!3.37e-09!23;UBERON:0003350!4.85e-09!9;UBERON:0004808!4.85e-09!9;UBERON:0001277!4.85e-09!9;UBERON:0004921!9.93e-09!126;UBERON:0004185!9.93e-09!126;UBERON:0002365!4.71e-08!25;UBERON:0002330!4.71e-08!25;UBERON:0005172!1.72e-07!49;UBERON:0005173!1.72e-07!49;UBERON:0002417!1.72e-07!49;UBERON:0000916!1.72e-07!49;UBERON:0004923!2.30e-07!24;UBERON:0000485!6.17e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.81e-21,15;UBERON:0000160,7.98e-20,31;UBERON:0001242,1.76e-16,13;UBERON:0001262,1.76e-16,13;UBERON:0004786,1.76e-16,13;UBERON:0004923,1.47e-12,24;UBERON:0005409,7.19e-12,47;UBERON:0003350,1.55e-11,9;UBERON:0004808,1.55e-11,9;UBERON:0001277,1.55e-11,9;UBERON:0001007,5.76e-10,116;UBERON:0001555,5.76e-10,116;UBERON:0007026,5.76e-10,116;UBERON:0004119,1.05e-09,118;UBERON:0000925,1.05e-09,118;UBERON:0006595,1.05e-09,118;UBERON:0000485,2.65e-09,11;UBERON:0004921,4.58e-08,114;UBERON:0001962,4.21e-07,2;UBERON:0001961,4.21e-07,2;UBERON:0001744,4.21e-07,2 | |||
|phase1_expression=0,5.23463111459042,3.63999391511629,10.5862473957391,7.01254021924886,1.6787927191189,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.95976510659561,4.12936705920906,1.72269589234506,3.01533397311352,2.15471232685889,1.14014051673824,1.00812051903972,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,2.15881276655127,3.24888208723835,4.48026887097336,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,3.17340679996253,0,0,0.257734922644187,0.80673409849337,1.55664630691409,0.570676878337677,1.89811624617805,0.823494773620054,0.251335208800269,0.795825888164603,0.779856348476481,0,3.6743468478698,2.58883655230677,0.189667900953082,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.632365371242573,3.24742325555125,2.35498091762062,1.85095745882701,2.07516838961004,0.333690211432188,0,0.224862112384854,0.811440485554012,0.964708639009667,0.763877555344259,1.15078454980324,0.162135226775035,0.549122826376163,1.43768206527355,0,0,0.252578877947112,3.58794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,1.23621034343337,0.64183841918363,0.252697211763798,0,0.754505365544305,0.0936415074698824,0.128050304809739,0.229741875822453,0.952587382566147,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.436039249896986,0.188218760830661,0.169229215783353,0.548783918618318,0,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0.935726433781634,0,0,0,0 | |||
|short_description=p20@Svil | |||
}} |
Latest revision as of 08:37, 27 September 2015
Short description: | p20@Svil |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Svil_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -23bp_to_ENSMUST00000153016_5end |
EntrezGene: | Svil |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.15e-17 | 6 |
gut absorptive cell | 1.15e-17 | 6 |
enterocyte | 1.15e-17 | 6 |
columnar/cuboidal epithelial cell | 4.87e-15 | 7 |
epithelial cell | 2.53e-14 | 25 |
intestinal epithelial cell | 1.55e-11 | 9 |
epithelial cell of alimentary canal | 1.55e-11 | 9 |
endodermal cell | 1.70e-10 | 20 |
M cell of gut | 1.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.81e-21 | 15 |
intestine | 7.98e-20 | 31 |
intestinal mucosa | 1.76e-16 | 13 |
wall of intestine | 1.76e-16 | 13 |
gastrointestinal system mucosa | 1.76e-16 | 13 |
organ component layer | 1.47e-12 | 24 |
gastrointestinal system | 7.19e-12 | 47 |
epithelium of mucosa | 1.55e-11 | 9 |
gastrointestinal system epithelium | 1.55e-11 | 9 |
intestinal epithelium | 1.55e-11 | 9 |
digestive system | 5.76e-10 | 116 |
digestive tract | 5.76e-10 | 116 |
primitive gut | 5.76e-10 | 116 |
endoderm-derived structure | 1.05e-09 | 118 |
endoderm | 1.05e-09 | 118 |
presumptive endoderm | 1.05e-09 | 118 |
simple columnar epithelium | 2.65e-09 | 11 |
subdivision of digestive tract | 4.58e-08 | 114 |
gut-associated lymphoid tissue | 4.21e-07 | 2 |
mucosa-associated lymphoid tissue | 4.21e-07 | 2 |
lymphoid tissue | 4.21e-07 | 2 |