FFCP PHASE1:Mm9::chr18:56721915..56721937,-: Difference between revisions
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{{FFCP|EntrezGene=110695|HGNC=|MCL_coexpression_id=8|UniProt=Q9DBF1|association_with_transcript=14bp_to_ENSMUST00000116635,NM_138600,uc008eyn.2_5end|description=CAGE_peak_3_at_Aldh7a1_5end|id=chr18:56721915..56721937,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!4.49e-14!85;UBERON:0002100!1.03e-12!98;UBERON:0002365!1.10e-12!25;UBERON:0002330!1.10e-12!25;UBERON:0002107!2.30e-11!22;UBERON:0007499!2.30e-11!22;UBERON:0006925!2.30e-11!22;UBERON:0009497!2.30e-11!22;UBERON:0000015!2.30e-11!22;UBERON:0002423!2.30e-11!22;UBERON:0006235!2.30e-11!22;UBERON:0008835!2.30e-11!22;UBERON:0003894!2.30e-11!22;UBERON:0004161!2.30e-11!22;UBERON:0008836!2.30e-11!22;UBERON:0000466!3.85e-11!79;UBERON:0005172!8.48e-11!49;UBERON:0005173!8.48e-11!49;UBERON:0002417!8.48e-11!49;UBERON:0000916!8.48e-11!49;UBERON:0009854!5.21e-10!23;UBERON:0009856!5.21e-10!23;UBERON:0009569!5.16e-09!66;UBERON:0003914!2.55e-08!47;UBERON:0004111!3.53e-08!122;UBERON:0005256!5.26e-08!47;UBERON:0000025!1.74e-07!114;UBERON:0001264!3.08e-07!12;UBERON:0003922!3.08e-07!12;UBERON:0002114!3.08e-07!12;UBERON:0003923!3.08e-07!12;UBERON:0003924!3.08e-07!12;UBERON:0003921!3.08e-07!12;UBERON:0000922!7.51e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.84e-14,79;UBERON:0002365,9.66e-13,25;UBERON:0002330,9.66e-13,25;UBERON:0002100,3.37e-12,90;UBERON:0002107,2.05e-11,22;UBERON:0007499,2.05e-11,22;UBERON:0006925,2.05e-11,22;UBERON:0009497,2.05e-11,22;UBERON:0000015,2.05e-11,22;UBERON:0002423,2.05e-11,22;UBERON:0006235,2.05e-11,22;UBERON:0008835,2.05e-11,22;UBERON:0003894,2.05e-11,22;UBERON:0004161,2.05e-11,22;UBERON:0008836,2.05e-11,22;UBERON:0005172,8.47e-11,49;UBERON:0005173,8.47e-11,49;UBERON:0002417,8.47e-11,49;UBERON:0000916,8.47e-11,49;UBERON:0009854,3.70e-10,23;UBERON:0009856,3.70e-10,23;UBERON:0003104,3.02e-09,61;UBERON:0009142,3.02e-09,61;UBERON:0009569,5.15e-09,66;UBERON:0003914,2.36e-08,47;UBERON:0004111,3.44e-08,122;UBERON:0005256,8.14e-08,45;UBERON:0000025,1.46e-07,114;UBERON:0001264,2.88e-07,12|phase1_expression=4.80446541314382,0,0,0.30246421130683,0,0.671517087647559,0.700837921786577,0.516493293766305,0.140788722151667,0.234064526321993,0,0.239316476986009,0.171200729931206,0.0874204024189974,0.333109761815663,0.809901069559304,0,0.157731082679119,0,0,12.5864069423583,1.58865521921416,0,0.95995453676044,1.37645568640302,0.57423196411502,1.29228598847722,0.646413698057667,0,0.504060259519861,1.10865255327652,0,0,0,0.866554859253824,1.16364251750945,0.612508068787107,0,0,0,0,0,0,3.14742044938943,3.85232338634155,5.68994931701213,4.69434806608824,18.0960879795771,23.9457939180574,23.7204476870626,18.7581804977986,21.5628846547457,0.167782606057736,1.45072428402269,0.672187598284928,4.63066984864705,6.30373567865265,7.73508138416164,2.83243045203437,2.11596391708813,3.1691570175309,15.2480039431109,17.7858959222228,0.449949858640699,0,2.8419204597844,7.78960287347852,4.2264013585371,3.62913643079672,2.97013064329719,2.3135745748652,5.71301968807607,6.84692476950002,1.83736198822431,3.25874601462004,0,1.10115880999389,4.72443150915195,3.84016333140609,3.16527090552465,1.64677758484337,2.08365348222704,3.62937898701795,3.93933827022176,5.80633341551878,4.71405736757868,5.12538050876771,2.79599168737951,0.605809546665472,1.51143120213571,2.89864488701678,111.85510400758,101.995700056163,123.59203088506,145.549917508278,130.375824145325,30.6168835887219,0.170430322578058,0.259786004602869,0.35333957451034,8.02807492727079,0,0,0,6.71122227134764,9.37431502257865,9.60496445528088,39.0508868639185,0.517875767294343,2.82040064223167,6.24547176358089,6.39377504455497,6.45723392316964,7.988299949289,5.05631440683531,4.52399728786832,12.1125534189843,1.01219549843938,0.884610551949874,1.45590164952668,1.76673214768315,0.484875253135222,0,4.39171195517321,5.65506108396329,2.55457055208591,0.958520996047362,0,0.635351135365324,4.19413790333504,1.83000241127451,2.01046963380583,4.51943232499919,3.06858548796397,5.194701113989,6.48965052271031,4.78645010096487,2.23932547098167,4.29628689337247,5.05060454127538,8.06746746368763,9.19608417733892,5.58192602396583,3.61691562805716,2.72145996605311,2.17793324484245,5.90320864726292,3.10444044886819,3.88022387279116,5.67318240503458,3.87092473160687,5.69908904311695,3.61461423993277,2.43776516565517,2.05782136407943,6.36909653819178,0,1.28673953557358,0.852490498186778,7.04227626620706,4.92504725960302,7.02242039697958,6.15536312521547,6.88674811115913,8.33042409591843,6.27841650826101,7.77992864058896,6.77238985729583,2.79751744852917,1.80584210487005,2.02672023864639,1.75439984910399,2.19550115291051,2.54992195644706,6.9395683026162,2.26390147234426,3.96502539580558,0.528901133327089,5.75878276445132,3.71578674976702,4.12375876230699,2.42020229548011,3.11329261382818,3.61428689613862,1.42358718463353,0.823494773620054,2.76468729680296,1.1937388322469,1.75467678407208,0,0.648414149624083,1.5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110695 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DBF1 | |||
|association_with_transcript=14bp_to_ENSMUST00000116635,NM_138600,uc008eyn.2_5end | |||
|cluster_id=chr18:56721915..56721937,- | |||
|description=CAGE_peak_3_at_Aldh7a1_5end | |||
|id=chr18:56721915..56721937,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!4.49e-14!85;UBERON:0002100!1.03e-12!98;UBERON:0002365!1.10e-12!25;UBERON:0002330!1.10e-12!25;UBERON:0002107!2.30e-11!22;UBERON:0007499!2.30e-11!22;UBERON:0006925!2.30e-11!22;UBERON:0009497!2.30e-11!22;UBERON:0000015!2.30e-11!22;UBERON:0002423!2.30e-11!22;UBERON:0006235!2.30e-11!22;UBERON:0008835!2.30e-11!22;UBERON:0003894!2.30e-11!22;UBERON:0004161!2.30e-11!22;UBERON:0008836!2.30e-11!22;UBERON:0000466!3.85e-11!79;UBERON:0005172!8.48e-11!49;UBERON:0005173!8.48e-11!49;UBERON:0002417!8.48e-11!49;UBERON:0000916!8.48e-11!49;UBERON:0009854!5.21e-10!23;UBERON:0009856!5.21e-10!23;UBERON:0009569!5.16e-09!66;UBERON:0003914!2.55e-08!47;UBERON:0004111!3.53e-08!122;UBERON:0005256!5.26e-08!47;UBERON:0000025!1.74e-07!114;UBERON:0001264!3.08e-07!12;UBERON:0003922!3.08e-07!12;UBERON:0002114!3.08e-07!12;UBERON:0003923!3.08e-07!12;UBERON:0003924!3.08e-07!12;UBERON:0003921!3.08e-07!12;UBERON:0000922!7.51e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.84e-14,79;UBERON:0002365,9.66e-13,25;UBERON:0002330,9.66e-13,25;UBERON:0002100,3.37e-12,90;UBERON:0002107,2.05e-11,22;UBERON:0007499,2.05e-11,22;UBERON:0006925,2.05e-11,22;UBERON:0009497,2.05e-11,22;UBERON:0000015,2.05e-11,22;UBERON:0002423,2.05e-11,22;UBERON:0006235,2.05e-11,22;UBERON:0008835,2.05e-11,22;UBERON:0003894,2.05e-11,22;UBERON:0004161,2.05e-11,22;UBERON:0008836,2.05e-11,22;UBERON:0005172,8.47e-11,49;UBERON:0005173,8.47e-11,49;UBERON:0002417,8.47e-11,49;UBERON:0000916,8.47e-11,49;UBERON:0009854,3.70e-10,23;UBERON:0009856,3.70e-10,23;UBERON:0003104,3.02e-09,61;UBERON:0009142,3.02e-09,61;UBERON:0009569,5.15e-09,66;UBERON:0003914,2.36e-08,47;UBERON:0004111,3.44e-08,122;UBERON:0005256,8.14e-08,45;UBERON:0000025,1.46e-07,114;UBERON:0001264,2.88e-07,12 | |||
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| |||
|short_description=p3@Aldh7a1 | |||
}} |
Latest revision as of 12:06, 1 October 2015
Short description: | p3@Aldh7a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Aldh7a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 14bp_to_ENSMUST00000116635, NM_138600, uc008eyn.2_5end |
EntrezGene: | Aldh7a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.84e-14 | 79 |
exocrine gland | 9.66e-13 | 25 |
exocrine system | 9.66e-13 | 25 |
trunk | 3.37e-12 | 90 |
liver | 2.05e-11 | 22 |
epithelial sac | 2.05e-11 | 22 |
digestive gland | 2.05e-11 | 22 |
epithelium of foregut-midgut junction | 2.05e-11 | 22 |
anatomical boundary | 2.05e-11 | 22 |
hepatobiliary system | 2.05e-11 | 22 |
foregut-midgut junction | 2.05e-11 | 22 |
hepatic diverticulum | 2.05e-11 | 22 |
liver primordium | 2.05e-11 | 22 |
septum transversum | 2.05e-11 | 22 |
liver bud | 2.05e-11 | 22 |
abdomen element | 8.47e-11 | 49 |
abdominal segment element | 8.47e-11 | 49 |
abdominal segment of trunk | 8.47e-11 | 49 |
abdomen | 8.47e-11 | 49 |
digestive tract diverticulum | 3.70e-10 | 23 |
sac | 3.70e-10 | 23 |
mesenchyme | 3.02e-09 | 61 |
entire embryonic mesenchyme | 3.02e-09 | 61 |
subdivision of trunk | 5.15e-09 | 66 |
epithelial tube | 2.36e-08 | 47 |
anatomical conduit | 3.44e-08 | 122 |
trunk mesenchyme | 8.14e-08 | 45 |
tube | 1.46e-07 | 114 |
pancreas | 2.88e-07 | 12 |